Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 TPTE2P4-201ENST00000258589 1605 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 MTND4P14-201ENST00000435799 1354 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 OR14L1P-202ENST00000641545 3009 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RNU6-190P-201ENST00000384154 102 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RPL32P23-201ENST00000397237 405 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RN7SKP114-201ENST00000410327 279 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RNU4-46P-201ENST00000410818 138 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 BX323014.1-201ENST00000412876 237 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 CHEK2P3-201ENST00000416118 248 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AL451054.2-201ENST00000420896 202 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 DDX39BP1-205ENST00000422507 192 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC092017.2-201ENST00000427600 362 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RPL7L1P10-201ENST00000427790 463 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 CALM2P2-201ENST00000428512 440 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RPL34P20-201ENST00000442771 351 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 ELOCP23-201ENST00000452014 332 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RPL21P8-201ENST00000465083 535 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RN7SL459P-201ENST00000481078 302 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC091885.1-201ENST00000506658 268 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 MRPS33P2-201ENST00000507850 322 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 BTF3P13-201ENST00000513224 490 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 SNORA31.3-201ENST00000516029 96 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RNU6-123P-201ENST00000516163 102 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RNU6-1073P-201ENST00000517182 106 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 EDDM3DP-201ENST00000554692 434 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AL121576.1-201ENST00000556055 276 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 RPL23AP84-201ENST00000571193 464 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 MIR5583-1-201ENST00000580941 59 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC174048.1-201ENST00000603389 144 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AL390240.1-201ENST00000612950 384 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AL355810.1-201ENST00000614629 552 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 uc_338.34-201ENST00000617467 174 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 EOGT-210ENST00000615922 1931 ntBASIC4.82□□□□□ -1.64
TRIM55Q9BYV6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 DEFB108F-201ENST00000344638 222 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RNU6-845P-201ENST00000362578 103 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RNU1-20P-201ENST00000363314 162 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 HSPD1P16-201ENST00000402302 394 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AL121834.1-202ENST00000404494 277 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 HDGFP1-201ENST00000405943 252 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RN7SKP177-201ENST00000410567 355 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 Y_RNA.615-201ENST00000410769 117 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 VDAC1P9-201ENST00000412766 841 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC009161.1-201ENST00000417306 376 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC245054.1-201ENST00000420944 258 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC245028.1-201ENST00000423259 256 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AL354714.3-201ENST00000447284 493 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AL645939.1-201ENST00000453429 797 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RPL5P30-201ENST00000465511 891 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AL049874.1-201ENST00000489560 388 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RNU6-677P-201ENST00000516914 101 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RAB11AP2-201ENST00000545905 639 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AL357559.1-201ENST00000622228 274 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 AL445487.1-201ENST00000415694 1580 ntBASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms