Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC243829.7-201ENST00000633081 225 ntBASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 TLK1P1-201ENST00000456760 2440 ntBASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 NCOA4P2-201ENST00000340589 1813 ntBASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 ASNSP1-201ENST00000518311 1939 ntBASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-3Q9BYR4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC241584.2-201ENST00000637142 2090 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC008758.3-201ENST00000507003 1829 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC092593.1-201ENST00000515413 1815 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-428P-201ENST00000362942 107 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 U3.2-201ENST00000362981 210 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNA5SP350-201ENST00000363298 111 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 SNORD115-13-201ENST00000363358 82 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 SNORA25.4-201ENST00000363666 124 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-103P-201ENST00000363686 107 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 SNORD115-16-201ENST00000363887 82 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 SNORD115-1-201ENST00000364961 82 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNA5SP30-201ENST00000365552 115 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 OR1L6-202ENST00000373684 1044 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.386-201ENST00000383913 105 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-578P-201ENST00000390980 103 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC005042.1-201ENST00000393397 800 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 U3.42-201ENST00000408746 214 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU4-30P-201ENST00000410245 143 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.617-201ENST00000410920 90 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 MYL6P5-201ENST00000412707 459 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 OR2AT2P-201ENST00000413438 905 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RPL30P2-201ENST00000414021 291 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 BX682237.1-201ENST00000415016 335 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 BMS1P17-202ENST00000416720 316 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 Z93242.1-201ENST00000427102 353 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC137499.1-201ENST00000427602 88 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RPL7L1P9-201ENST00000431298 745 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 SNRPEP7-201ENST00000438350 220 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AL450023.1-201ENST00000450868 751 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 HSPE1P13-201ENST00000451143 297 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC005532.2-201ENST00000467154 373 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC100832.1-201ENST00000471945 383 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RPS17P15-201ENST00000475609 349 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 BX284632.1-201ENST00000478218 541 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC023818.1-201ENST00000498379 384 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-583P-201ENST00000516012 92 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 RNU6-781P-201ENST00000516377 101 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 Y_RNA.706-201ENST00000516933 99 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AF279873.1-201ENST00000523393 313 ntBASIC1.92□□□□□ -2.1
KRTAP4-3Q9BYR4 AC009643.1-201ENST00000532030 391 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms