Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 SYF2P2-201ENST00000417620 583 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 BX295541.1-201ENST00000417774 250 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 DBIP2-201ENST00000419076 262 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AL031736.2-201ENST00000426573 787 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC104850.1-201ENST00000435940 476 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 CALM1P1-201ENST00000442082 433 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RBM43P1-201ENST00000476891 1081 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RNF138P1-201ENST00000502765 546 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RNU6-488P-201ENST00000515918 99 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RNU6-150P-201ENST00000516237 95 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RNU6-1003P-201ENST00000517099 105 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AL389895.1-201ENST00000554127 252 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 MIR4738-201ENST00000579134 87 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC245014.2-201ENST00000603689 287 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 BCRP9-201ENST00000605312 388 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC246785.4-201ENST00000605374 287 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC126177.8-201ENST00000618339 1015 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC039056.2-201ENST00000622261 511 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AL732372.2-225ENST00000642124 456 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 Y_RNA.1-201ENST00000352915 104 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 Y_RNA.160-201ENST00000363677 92 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 RNU6-769P-201ENST00000384407 104 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 Y_RNA.509-201ENST00000384506 99 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 RNU6-780P-201ENST00000391030 104 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 U3.39-201ENST00000408569 239 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 LSM1P1-201ENST00000438629 273 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 OR6K1P-201ENST00000456766 971 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 RPS3AP50-201ENST00000487064 803 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 RPL30P11-201ENST00000495304 339 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC105914.1-201ENST00000511798 226 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 SNORA70.18-201ENST00000516696 98 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 RNU2-46P-201ENST00000517038 113 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC023632.4-201ENST00000517783 191 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 MTND1P35-201ENST00000526739 508 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AL512360.1-201ENST00000555346 234 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 CENPUP2-201ENST00000555897 1186 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 MIR3158-1-201ENST00000583596 81 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC017100.2-201ENST00000584628 355 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 TPMTP1-201ENST00000592307 737 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 NRBF2P5-201ENST00000603087 788 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC024220.1-201ENST00000603675 484 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC010680.3-201ENST00000604215 520 ntBASIC4.43□□□□□ -1.7
SALL3Q9BXA9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SALL3Q9BXA9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.42□□□□□ -1.7
SALL3Q9BXA9 SNORD9-201ENST00000362566 104 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 RNU6-483P-201ENST00000384088 108 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 RNU2-28P-201ENST00000410457 189 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 SNORA57.3-201ENST00000411095 141 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 RPS20P15-201ENST00000412792 311 ntBASIC4.42□□□□□ -1.7
SALL3Q9BXA9 RPS12P5-201ENST00000423449 371 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms