Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 Z75741.2-201ENST00000417272 1167 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 MTCO2P5-201ENST00000422621 426 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.88□□□□□ -1.95
NPAS2Q99743 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.88□□□□□ -1.95
NPAS2Q99743 MTND4P6-201ENST00000438297 472 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS2Q99743 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.88□□□□□ -1.95
NPAS2Q99743 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.88□□□□□ -1.95
NPAS2Q99743 AP001486.1-201ENST00000463339 476 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AL049873.1-201ENST00000480540 376 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AC108734.3-201ENST00000481241 1165 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS2Q99743 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.88□□□□□ -1.95
NPAS2Q99743 OR5G4P-201ENST00000525251 760 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS2Q99743 PSMA2P1-201ENST00000526365 646 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS2Q99743 AP000867.2-201ENST00000532468 320 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.88□□□□□ -1.95
NPAS2Q99743 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPAS2Q99743 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.88□□□□□ -1.95
NPAS2Q99743 EIF4BP1-201ENST00000554881 351 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 HMGB1P14-201ENST00000557424 591 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS2Q99743 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS2Q99743 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.88□□□□□ -1.95
NPAS2Q99743 AL451007.1-201ENST00000595491 289 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 BNIP3P11-201ENST00000603878 563 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AL137843.1-201ENST00000605078 385 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AC112220.2-201ENST00000605513 533 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AC004832.5-201ENST00000608677 401 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AL133445.2-201ENST00000611191 527 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 DUXAP10-204ENST00000612052 616 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 MIR6733-201ENST00000635723 61 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 ASNSP3-201ENST00000451989 1306 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 TPTE2P4-201ENST00000258589 1605 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 RPL9P7-201ENST00000330965 580 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
NPAS2Q99743 SNORD15B-201ENST00000384714 146 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 DHFRP6-201ENST00000401776 268 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AL122016.1-201ENST00000403365 367 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AL138885.1-201ENST00000405921 675 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.87□□□□□ -1.95
NPAS2Q99743 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.87□□□□□ -1.95
NPAS2Q99743 SDCBPP1-201ENST00000440192 890 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 RPL26P6-201ENST00000440913 438 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.87□□□□□ -1.95
NPAS2Q99743 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AC016696.1-201ENST00000446949 318 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AC079203.1-201ENST00000487972 404 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 HMGB1P28-201ENST00000507778 552 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.87□□□□□ -1.95
NPAS2Q99743 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.87□□□□□ -1.95
NPAS2Q99743 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.87□□□□□ -1.95
NPAS2Q99743 AC090615.1-201ENST00000577519 154 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AL033523.1-201ENST00000605153 153 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AC009237.15-201ENST00000610252 501 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AC069234.5-201ENST00000611056 416 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AC107871.2-201ENST00000612894 502 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 MIR6130-201ENST00000619419 109 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AC099506.2-201ENST00000623074 221 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 SCARNA15.3-201ENST00000626315 122 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 SCARNA4.1-201ENST00000628597 123 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 MIR622-201ENST00000638396 96 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 API5P2-201ENST00000397055 1498 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NPAS2Q99743 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.87□□□□□ -1.95
NPAS2Q99743 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NPAS2Q99743 AC109315.1-201ENST00000584143 1347 ntBASIC2.87□□□□□ -1.95
NPAS2Q99743 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.87□□□□□ -1.95
NPAS2Q99743 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPAS2Q99743 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
NPAS2Q99743 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NPAS2Q99743 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
NPAS2Q99743 RNU6-1122P-201ENST00000384449 107 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 RNU6-1000P-201ENST00000391066 106 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 AL590004.2-201ENST00000404787 371 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 RN7SKP220-201ENST00000410611 288 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 ATG3P1-201ENST00000419507 911 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 THAP5P1-201ENST00000439089 262 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.86□□□□□ -1.95
NPAS2Q99743 NANOGNBP1-201ENST00000448444 480 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 AC010099.1-201ENST00000455434 375 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 RPS29P12-201ENST00000460178 152 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 RPL31P60-201ENST00000478450 367 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.86□□□□□ -1.95
NPAS2Q99743 AC114322.1-201ENST00000506771 926 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 SUMO2P5-201ENST00000506790 245 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.86□□□□□ -1.95
NPAS2Q99743 CASP1P1-201ENST00000526345 212 ntBASIC2.86□□□□□ -1.95
NPAS2Q99743 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.86□□□□□ -1.95
NPAS2Q99743 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.86□□□□□ -1.95
NPAS2Q99743 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.86□□□□□ -1.95
NPAS2Q99743 DUXAP4-201ENST00000603046 613 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms