Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC123904.3-201ENST00000547218 814 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 HSPE1P5-201ENST00000561489 272 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC025627.2-201ENST00000576220 160 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC022655.2-201ENST00000577280 318 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 MIR5684-201ENST00000585074 65 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL137849.1-201ENST00000604767 169 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC113403.1-201ENST00000604910 193 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC108747.1-201ENST00000609508 535 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC131902.3-201ENST00000611767 581 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 FAM27D1-201ENST00000612308 341 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL110115.1-201ENST00000614396 364 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC013476.2-201ENST00000614456 459 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 MIR6780A-201ENST00000615089 68 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AP001506.1-201ENST00000615444 211 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 uc_338.12-201ENST00000616344 181 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL603839.4-201ENST00000624658 1005 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AL390237.1-201ENST00000404226 1415 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 OR56B2P-202ENST00000641377 2453 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
NR1H4Q96RI1 AC002546.1-201ENST00000588041 2504 ntBASIC3.6□□□□□ -1.83
NR1H4Q96RI1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 RNY3P13-201ENST00000365542 102 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 Y_RNA.553-201ENST00000384670 102 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 MIR493-201ENST00000385254 89 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AP000567.1-201ENST00000406413 156 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 RNA5SP31-201ENST00000411144 127 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 RNA5SP107-201ENST00000411358 122 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 RPS15AP12-201ENST00000419498 388 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 MTCO2P34-201ENST00000421994 607 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 USP12PX-201ENST00000432383 1057 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 SNORA71B-202ENST00000439232 272 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 SNORD42A-201ENST00000459584 64 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC084198.1-201ENST00000477747 402 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 LARP1BP2-201ENST00000486594 519 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AK3P4-201ENST00000504283 583 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC111000.3-201ENST00000508057 576 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 Y_RNA.672-201ENST00000516289 104 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 RNU6-64P-201ENST00000517119 105 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC007115.1-201ENST00000546853 234 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 TRAV37-201ENST00000553906 342 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AL358072.1-201ENST00000604156 575 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AP000254.1-201ENST00000609934 520 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC010133.1-201ENST00000615809 842 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 SNHG22-203ENST00000617833 660 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 AC116667.1-201ENST00000604855 2072 ntBASIC3.59□□□□□ -1.83
NR1H4Q96RI1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
NR1H4Q96RI1 AC118273.1-201ENST00000525324 3006 ntBASIC3.59□□□□□ -1.84
NR1H4Q96RI1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
NR1H4Q96RI1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
NR1H4Q96RI1 AC073073.2-201ENST00000609827 2578 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 MTND5P27-201ENST00000428871 1720 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 GNG5P1-201ENST00000255500 204 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 SNORA60-201ENST00000362396 134 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 RNA5SP505-201ENST00000364748 108 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 RNY4P16-201ENST00000364768 94 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 SNORA48.8-201ENST00000391324 134 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AL591034.1-201ENST00000407447 340 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms