Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC012443.1-201ENST00000605605 231 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC103810.6-201ENST00000606708 136 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 OR2AS2P-201ENST00000606902 342 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC135507.1-201ENST00000607214 561 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC004775.1-201ENST00000607389 753 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC107214.2-201ENST00000608204 634 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC096577.2-201ENST00000611455 153 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC004852.3-201ENST00000614131 326 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 MIR6766-201ENST00000622641 72 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.67□□□□□ -2.14
AP1S3Q96PC3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.67□□□□□ -2.14
AP1S3Q96PC3 MIR7515-201ENST00000637837 67 ntBASIC1.67□□□□□ -2.14
AP1S3Q96PC3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RNU6-441P-201ENST00000384545 106 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 MIR518C-201ENST00000384822 101 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 MIR196B-201ENST00000384852 84 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 FABP12P1-201ENST00000401911 322 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RN7SKP140-201ENST00000411196 284 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 ZNF90P2-204ENST00000419323 1075 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RNF19BPX-201ENST00000426224 625 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RPS15AP28-201ENST00000435088 386 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC107083.1-201ENST00000439643 279 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 XKRY2-201ENST00000442362 1093 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RAB11AP1-201ENST00000442978 646 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 KLF3P2-201ENST00000465138 268 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC011825.1-201ENST00000484967 388 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RNU6-488P-201ENST00000515918 99 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 MIR514B-201ENST00000516774 80 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 OR4K7P-201ENST00000580232 945 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AL451007.1-201ENST00000595491 289 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AP000254.1-201ENST00000609934 520 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 MIR6132-201ENST00000622083 109 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC040168.1-201ENST00000623594 991 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC111188.2-201ENST00000529697 1387 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 AC073346.2-201ENST00000624724 2058 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 TPTE2P4-201ENST00000258589 1605 ntBASIC1.66□□□□□ -2.14
AP1S3Q96PC3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
AP1S3Q96PC3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
AP1S3Q96PC3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 SNORA51.12-201ENST00000384448 134 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 VTA1P1-201ENST00000414044 866 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 RPL27AP8-201ENST00000424277 446 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 Z85994.2-201ENST00000434327 452 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 HMGN1P8-201ENST00000463578 288 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC025033.1-201ENST00000463883 194 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 RPL30P5-201ENST00000494923 336 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 RNU6-928P-201ENST00000516876 104 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC008676.3-201ENST00000521237 435 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC022616.2-201ENST00000523185 300 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC135628.1-201ENST00000568867 534 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 MIR5007-201ENST00000583098 95 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 MIR3935-201ENST00000583472 104 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 VN1R90P-201ENST00000595717 726 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC007179.3-201ENST00000604976 235 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC013562.2-201ENST00000611632 603 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC009159.1-201ENST00000618386 642 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 DUXAP9-208ENST00000622815 614 ntBASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
AP1S3Q96PC3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.64□□□□□ -2.15
AP1S3Q96PC3 RNU6-173P-201ENST00000364215 104 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 RNU6-7-201ENST00000364784 107 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 RNU6-8-201ENST00000365467 107 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
AP1S3Q96PC3 RNU6-220P-201ENST00000390919 107 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 RNU2-52P-201ENST00000410680 190 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 RNU6-1328P-201ENST00000410938 106 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 TATDN1P1-201ENST00000414123 891 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC010881.1-201ENST00000433830 235 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC044797.1-201ENST00000445744 679 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 RNA5SP233-201ENST00000459153 113 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC015724.1-201ENST00000478577 156 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC093770.1-201ENST00000511559 571 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.64□□□□□ -2.15
AP1S3Q96PC3 GTF3AP2-201ENST00000557014 266 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC068135.2-201ENST00000569293 1028 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.64□□□□□ -2.15
AP1S3Q96PC3 AC090897.2-201ENST00000581715 130 ntBASIC1.64□□□□□ -2.15
AP1S3Q96PC3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms