Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.1□□□□□ -1.91
USP47Q96K76 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.1□□□□□ -1.91
USP47Q96K76 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
USP47Q96K76 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.1□□□□□ -1.91
USP47Q96K76 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.1□□□□□ -1.91
USP47Q96K76 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.1□□□□□ -1.91
USP47Q96K76 AC121161.1-201ENST00000510606 652 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 AC010265.1-201ENST00000513509 211 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.1□□□□□ -1.91
USP47Q96K76 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 AC087241.2-201ENST00000535801 324 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 LSM6P2-201ENST00000552208 177 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.1□□□□□ -1.91
USP47Q96K76 SNORD39.3-201ENST00000584451 71 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 CR381572.1-201ENST00000625098 102 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
USP47Q96K76 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP47Q96K76 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP47Q96K76 MTND4P34-201ENST00000572715 1371 ntBASIC3.1□□□□□ -1.91
USP47Q96K76 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP47Q96K76 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.09□□□□□ -1.91
USP47Q96K76 AC004925.1-201ENST00000624256 2706 ntBASIC3.09□□□□□ -1.91
USP47Q96K76 ZNF849P-201ENST00000594711 1566 ntBASIC3.09□□□□□ -1.91
USP47Q96K76 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP47Q96K76 RNU6-1249P-201ENST00000363237 111 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 DEFB109C-201ENST00000382575 264 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 DEFB109B-201ENST00000382656 264 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 MIR16-1-201ENST00000385271 89 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 MTND4P13-201ENST00000402078 1023 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 U3.37-201ENST00000408528 213 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.09□□□□□ -1.92
USP47Q96K76 FNDC3CP-201ENST00000420795 1155 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.09□□□□□ -1.92
USP47Q96K76 DEFB130D-201ENST00000426866 237 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AL035410.1-201ENST00000427409 427 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.09□□□□□ -1.92
USP47Q96K76 AC078857.1-201ENST00000469870 667 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 MTCO3P35-201ENST00000485582 781 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
USP47Q96K76 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
USP47Q96K76 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.09□□□□□ -1.92
USP47Q96K76 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
USP47Q96K76 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
USP47Q96K76 MTND3P24-201ENST00000506306 329 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.09□□□□□ -1.92
USP47Q96K76 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
USP47Q96K76 SCARNA16.3-201ENST00000516595 184 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.09□□□□□ -1.92
USP47Q96K76 AC026464.5-201ENST00000562497 722 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AC009977.1-201ENST00000586015 570 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 NRBF2P1-201ENST00000587407 859 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.09□□□□□ -1.92
USP47Q96K76 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.09□□□□□ -1.92
USP47Q96K76 AL451074.6-201ENST00000608512 729 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.09□□□□□ -1.92
USP47Q96K76 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.09□□□□□ -1.92
USP47Q96K76 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
USP47Q96K76 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
USP47Q96K76 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
USP47Q96K76 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.08□□□□□ -1.92
USP47Q96K76 TRIAP1P1-201ENST00000427062 225 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 RPL17P35-201ENST00000432217 549 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.08□□□□□ -1.92
USP47Q96K76 MTCO3P11-201ENST00000455103 774 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 AC027673.1-201ENST00000456245 405 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 RNU7-140P-201ENST00000459546 60 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 AC091179.1-201ENST00000461606 579 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.08□□□□□ -1.92
USP47Q96K76 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.08□□□□□ -1.92
USP47Q96K76 AC027338.1-201ENST00000514840 825 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 RNA5SP200-201ENST00000516360 103 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 RNA5SP402-201ENST00000517148 110 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 SNRPGP18-201ENST00000553000 214 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 AC087481.2-201ENST00000565492 330 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 MTCO1P40-201ENST00000574371 625 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 AC013562.2-201ENST00000611632 603 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 AC073968.1-201ENST00000618594 637 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
USP47Q96K76 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.08□□□□□ -1.92
USP47Q96K76 MTND2P41-201ENST00000637599 773 ntBASIC3.08□□□□□ -1.92
USP47Q96K76 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USP47Q96K76 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
USP47Q96K76 RNU6-50P-201ENST00000362356 103 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 RNA5SP295-201ENST00000362655 121 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 OR1L1-202ENST00000373686 1083 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 AC234064.1-201ENST00000436312 247 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 OR51B8P-201ENST00000449892 769 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.07□□□□□ -1.92
USP47Q96K76 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.07□□□□□ -1.92
USP47Q96K76 AP000889.2-201ENST00000532684 490 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.07□□□□□ -1.92
USP47Q96K76 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.07□□□□□ -1.92
USP47Q96K76 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.07□□□□□ -1.92
USP47Q96K76 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.07□□□□□ -1.92
USP47Q96K76 MIR4789-201ENST00000577469 82 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.07□□□□□ -1.92
USP47Q96K76 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms