Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPS27AP8-201ENST00000452665 445 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 VN1R105P-201ENST00000486595 910 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 LINC00888-204ENST00000487386 421 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 MTND5P4-201ENST00000514978 288 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 CYCSP30-201ENST00000546447 172 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC125611.2-201ENST00000551907 647 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 SETP2-201ENST00000553886 926 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC008015.1-201ENST00000555505 465 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 MIR544B-201ENST00000582372 78 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AP002826.1-201ENST00000608835 315 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC009268.2-201ENST00000621925 457 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AL354798.1-201ENST00000622505 329 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC243312.2-201ENST00000623340 601 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC079597.1-201ENST00000624306 508 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 MIR4275-201ENST00000636486 87 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC007671.2-201ENST00000637344 619 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 AC007823.1-201ENST00000569932 1566 ntBASIC3.12□□□□□ -1.91
RFT1Q96AA3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RFT1Q96AA3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFT1Q96AA3 API5P2-201ENST00000397055 1498 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC068538.1-201ENST00000376856 336 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 RNU6-637P-201ENST00000384050 107 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 RNU6-769P-201ENST00000384407 104 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC109780.2-201ENST00000413467 845 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 MORF4L1P6-201ENST00000418771 268 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC233728.2-201ENST00000425348 757 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 RPL21P40-201ENST00000428586 483 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 MTND5P2-201ENST00000442927 1142 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 RPL17P49-201ENST00000443728 411 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 OR6C5P-201ENST00000452388 923 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 HMGN2P13-201ENST00000476476 274 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC021205.2-201ENST00000480069 347 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 ERHP1-201ENST00000523006 310 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AP004247.1-201ENST00000531556 1289 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFT1Q96AA3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC090888.1-201ENST00000561335 1141 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC006077.1-201ENST00000604746 343 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AL136295.6-201ENST00000610486 658 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 AL732618.1-201ENST00000623251 301 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RFT1Q96AA3 AC099063.3-201ENST00000642066 185 ntBASIC3.11□□□□□ -1.91
RFT1Q96AA3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFT1Q96AA3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFT1Q96AA3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFT1Q96AA3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RFT1Q96AA3 MTND5P33-201ENST00000571250 1450 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 AC011460.1-201ENST00000636268 1834 ntBASIC3.1□□□□□ -1.91
RFT1Q96AA3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFT1Q96AA3 RPL32P23-201ENST00000397237 405 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms