Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC124864.2-201ENST00000624736 186 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 MIR4275-201ENST00000636486 87 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 OR5H6-203ENST00000642105 978 ntBASIC4.41□□□□□ -1.7
HPS3Q969F9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS3Q969F9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS3Q969F9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS3Q969F9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HPS3Q969F9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS3Q969F9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS3Q969F9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HPS3Q969F9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HPS3Q969F9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HPS3Q969F9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HPS3Q969F9 OR1S2-201ENST00000302592 978 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HPS3Q969F9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HPS3Q969F9 SNORA60-201ENST00000362396 134 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 RNU4-1-201ENST00000363925 141 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 RNU6-629P-201ENST00000384061 103 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AL109755.1-201ENST00000401791 649 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 RPL21P65-201ENST00000406094 466 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AC108032.1-201ENST00000416706 207 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HPS3Q969F9 DPPA2P1-201ENST00000428060 556 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS3Q969F9 USP9YP7-201ENST00000436723 430 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 HMGN2P21-201ENST00000447764 270 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AL451050.1-201ENST00000450126 415 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 HMGB3P22-202ENST00000451823 572 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 USP9YP32-201ENST00000452432 430 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS3Q969F9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC126182.1-201ENST00000478134 357 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 RPS26P15-201ENST00000488067 348 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AC007182.2-201ENST00000489251 402 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 RPL21P129-201ENST00000491732 478 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AL132838.2-201ENST00000492041 314 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS3Q969F9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC021146.1-201ENST00000511202 716 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AL117351.2-201ENST00000513571 157 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS3Q969F9 MED28P5-201ENST00000528254 438 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS3Q969F9 MTATP6P3-201ENST00000581686 676 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC010928.3-201ENST00000587712 541 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC005255.1-201ENST00000593748 216 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS3Q969F9 AC091167.4-201ENST00000605079 184 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AL034351.1-201ENST00000605288 668 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 AC243312.2-201ENST00000623340 601 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 LRRC77P-213ENST00000637727 880 ntBASIC4.4□□□□□ -1.71
HPS3Q969F9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HPS3Q969F9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
HPS3Q969F9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS3Q969F9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS3Q969F9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS3Q969F9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HPS3Q969F9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HPS3Q969F9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HPS3Q969F9 MIR181A1-201ENST00000385026 110 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AL691449.1-201ENST00000426570 421 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC073464.1-201ENST00000429823 534 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC004866.2-201ENST00000438285 481 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC093392.2-201ENST00000450682 337 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 RPS7P7-201ENST00000463499 571 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AL049714.1-201ENST00000466686 347 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AC023194.1-201ENST00000493084 308 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.39□□□□□ -1.71
HPS3Q969F9 SNORA31.20-201ENST00000517111 133 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 RNA5SP179-201ENST00000517284 121 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HPS3Q969F9 MTCYBP41-201ENST00000528913 1123 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.39□□□□□ -1.71
HPS3Q969F9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC087481.2-201ENST00000565492 330 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 MIR3167-201ENST00000579623 85 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 BNIP3P22-201ENST00000593399 556 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 AC067959.1-201ENST00000604334 379 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms