Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AL355810.1-201ENST00000614629 552 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 MIR6715A-201ENST00000615929 79 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AC099654.9-201ENST00000637055 678 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01560Q8TB33 MTND4P34-201ENST00000572715 1371 ntBASIC2.35□□□□□ -2.03
LINC01560Q8TB33 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC005183.1-201ENST00000603687 1979 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 XGY1-201ENST00000381172 446 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 CYCSP45-201ENST00000402289 315 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 RNU4-22P-201ENST00000411058 166 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 EZH2P1-201ENST00000431167 291 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 MTND2P5-201ENST00000432656 1006 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 RPL23AP74-201ENST00000437246 471 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 MTND2P20-201ENST00000440805 661 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 RPL7P36-201ENST00000444633 681 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 Z82190.1-201ENST00000454534 490 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 RPL21P104-201ENST00000464143 478 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 KCTD9P5-201ENST00000504141 1170 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC114322.1-201ENST00000506771 926 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC010625.1-201ENST00000511296 403 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 RNY4P37-201ENST00000516225 96 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 RNA5SP468-201ENST00000516782 93 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 OR10V3P-201ENST00000525712 725 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 SNRPGP16-201ENST00000533275 226 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 MTCYBP23-201ENST00000558717 1102 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 HSPE1P3-201ENST00000559254 309 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC027176.1-201ENST00000560204 514 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC004832.5-201ENST00000608677 401 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AL020991.1-201ENST00000612314 373 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 AC004009.2-201ENST00000623016 728 ntBASIC2.34□□□□□ -2.03
LINC01560Q8TB33 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LINC01560Q8TB33 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LINC01560Q8TB33 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
LINC01560Q8TB33 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
LINC01560Q8TB33 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LINC01560Q8TB33 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RPL9P7-201ENST00000330965 580 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RNU6-50P-201ENST00000362356 103 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 MIR181A2-201ENST00000384863 110 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AL590084.1-201ENST00000407885 387 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RNU2-47P-201ENST00000410649 186 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AL356320.2-201ENST00000417263 507 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RPS3AP37-201ENST00000419176 745 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC007742.1-201ENST00000425789 329 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AL590233.1-201ENST00000430017 456 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC112220.1-201ENST00000434628 355 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 ELOCP26-201ENST00000436067 329 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RPL23AP22-201ENST00000437556 453 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 FTH1P1-201ENST00000437933 532 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC125238.1-201ENST00000448842 249 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 OFD1P3Y-201ENST00000453312 783 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RPL18AP17-201ENST00000455326 198 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RPS3P1-201ENST00000456781 192 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC003982.1-202ENST00000469928 248 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC090453.1-201ENST00000495560 436 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC021146.5-201ENST00000503544 545 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC119751.4-201ENST00000507498 357 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 KLHL2P1-201ENST00000508691 521 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 MTATP6P9-201ENST00000515039 680 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 IGHV3-76-201ENST00000522465 295 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 OR5AK1P-201ENST00000524837 922 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AP001646.1-201ENST00000527936 915 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 SETP7-201ENST00000552169 453 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AADACP1-206ENST00000561502 1193 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 FAM60BP-201ENST00000578364 658 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AP001029.3-201ENST00000588063 596 ntBASIC2.33□□□□□ -2.04
LINC01560Q8TB33 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms