Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-397P-201ENST00000516226 104 ntBASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 RNU6-897P-201ENST00000517135 105 ntBASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 DEFB109D-201ENST00000529497 240 ntBASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 U2.14-201ENST00000615943 113 ntBASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 BX005214.3-202ENST00000619809 325 ntBASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 AL357559.1-201ENST00000622228 274 ntBASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 AC108751.5-201ENST00000492880 1336 ntBASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NEDD1Q8NHV4 SMG1P6-201ENST00000532337 2930 ntBASIC5.71□□□□□ -1.49
NEDD1Q8NHV4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NEDD1Q8NHV4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.71□□□□□ -1.49
NEDD1Q8NHV4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NEDD1Q8NHV4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
NEDD1Q8NHV4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.71□□□□□ -1.49
NEDD1Q8NHV4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.314-201ENST00000365114 102 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 SNORD50.2-201ENST00000365465 70 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNY1P5-201ENST00000383890 115 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNU6-641P-201ENST00000384006 107 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNU6-306P-201ENST00000384617 107 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 MIR320B1-201ENST00000390209 79 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNA5SP219-201ENST00000390940 113 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 CYB5AP4-201ENST00000396692 399 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 EIF5P1-201ENST00000400019 1231 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNU6-121P-201ENST00000410525 99 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNU2-51P-201ENST00000410708 197 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.793-201ENST00000411222 111 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RPS3AP12-201ENST00000443616 753 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RPS5P7-201ENST00000456664 608 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RPL9P32-201ENST00000464118 620 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AC098583.1-201ENST00000480875 255 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 SCARNA22-201ENST00000503991 125 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNU6-202P-201ENST00000515998 96 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNU4-71P-201ENST00000516258 113 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.719-201ENST00000517156 106 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 IGKV1-32-201ENST00000519290 311 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RPL23AP53-201ENST00000521854 457 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AC091516.1-201ENST00000549191 703 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 DYNLL1P4-201ENST00000549314 266 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AC063949.1-201ENST00000552900 865 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 MIR4270-201ENST00000581799 70 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 MIR5692C1-201ENST00000585309 91 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AC022726.1-201ENST00000587475 207 ntBASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NEDD1Q8NHV4 AC092376.2-201ENST00000622621 4116 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.122-201ENST00000363331 96 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 RNU6-682P-201ENST00000363843 106 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.269-201ENST00000364685 89 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 SNORD115-7-201ENST00000365306 82 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AL356421.1-201ENST00000403255 413 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AL590139.1-201ENST00000416267 400 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 RPL12P34-201ENST00000424532 479 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 PABPC1P3-201ENST00000469174 459 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 RN7SKP276-201ENST00000516242 268 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AP006587.4-201ENST00000526053 529 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AC087441.2-201ENST00000529141 262 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AC068790.3-201ENST00000602988 553 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AL121932.1-201ENST00000605542 214 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 MIR6780A-201ENST00000615089 68 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms