Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AL121834.1-202ENST00000404494 277 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AL359634.1-202ENST00000404721 284 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AL160275.2-201ENST00000412010 394 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC068533.1-201ENST00000418542 415 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 SAR1AP4-201ENST00000429225 591 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC018644.1-201ENST00000429934 551 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 MTCYBP6-201ENST00000441810 138 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 Y_RNA.632-201ENST00000459189 102 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC008481.1-201ENST00000463278 396 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC098591.2-201ENST00000510152 315 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 RNU6-1038P-201ENST00000516516 104 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 RN7SKP66-201ENST00000516681 231 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC008694.2-201ENST00000517591 306 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 DEFB109D-201ENST00000529497 240 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AL442663.2-201ENST00000554385 511 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC091178.1-203ENST00000584586 279 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 HMGB2P1-201ENST00000591146 634 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AL022099.1-201ENST00000604551 712 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 CTHRC1P1-201ENST00000605383 469 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AL390240.1-201ENST00000612950 384 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AC004696.1-201ENST00000614345 607 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 SNHG22-203ENST00000617833 660 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 AL645937.1-201ENST00000641739 1652 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HIPK4Q8NE63 ZFRP1-201ENST00000457579 2970 ntBASIC4.44□□□□□ -1.7
HIPK4Q8NE63 API5P2-201ENST00000397055 1498 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC068254.2-201ENST00000623938 3577 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 SNORA63-201ENST00000363450 132 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 Y_RNA.378-201ENST00000365652 113 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 RNU6-1279P-201ENST00000383917 103 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL356967.1-201ENST00000406305 431 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC114755.2-201ENST00000413520 361 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 RPL21P91-201ENST00000429231 479 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC005534.2-201ENST00000431047 433 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 CKS1BP5-201ENST00000434172 273 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 MTCO3P45-201ENST00000443036 613 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 PRPS1P1-201ENST00000445305 876 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 NDUFS5P3-201ENST00000450668 321 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 RNU6-1208P-201ENST00000459588 107 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC140172.1-201ENST00000502928 141 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC117522.3-201ENST00000507974 584 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 RNA5SP154-201ENST00000516193 111 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AP001804.3-201ENST00000525146 880 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC006116.3-201ENST00000592968 361 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 BNIP3P25-201ENST00000596023 559 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 RPL7P50-201ENST00000600588 727 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC008638.3-201ENST00000603341 463 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL161729.3-201ENST00000603533 673 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL034351.1-201ENST00000605288 668 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL133255.1-201ENST00000606374 441 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AC092807.2-201ENST00000609367 243 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 C4BPAP1-201ENST00000415474 1893 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 AL442639.1-201ENST00000625030 1899 ntBASIC4.43□□□□□ -1.7
HIPK4Q8NE63 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HIPK4Q8NE63 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms