Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AL591704.1-201ENST00000432574 275 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 SNAP23P1-201ENST00000433229 246 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 RPS11P1-201ENST00000451072 473 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 RNU7-167P-201ENST00000459160 62 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 DYNLL1P5-201ENST00000467158 270 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 BX284632.1-201ENST00000478218 541 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AC093303.1-201ENST00000514549 295 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.689-201ENST00000516589 107 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AC018630.1-201ENST00000541376 925 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 BNIP3P1-201ENST00000547295 580 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AC006349.1-201ENST00000555526 235 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 SNORD84-203ENST00000584275 78 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AC011447.4-201ENST00000587562 111 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 DUSP12P1-201ENST00000612874 516 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 SDR42E1P2-201ENST00000614861 481 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC139769.1-204ENST00000472297 1931 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AL049555.1-201ENST00000562834 1933 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 U8.4-201ENST00000363626 134 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 SNORA63C-201ENST00000364578 129 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 SNORD116-11-201ENST00000383882 92 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.395-201ENST00000383945 109 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 SNORD3H-201ENST00000384486 214 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 SNORA11B-201ENST00000408175 129 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RNU6-1304P-201ENST00000411374 106 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RPLP0P7-201ENST00000416050 667 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 FGF7P3-201ENST00000454645 303 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RNU6-953P-201ENST00000459154 107 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AP001086.1-201ENST00000494882 321 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AP002812.1-201ENST00000495378 474 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC079140.5-201ENST00000507882 310 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RN7SKP60-201ENST00000516985 239 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC090115.3-201ENST00000553218 849 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC016925.2-201ENST00000605108 242 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 ATP1B3P1-201ENST00000605365 821 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC004696.1-201ENST00000614345 607 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 MIR6715B-201ENST00000637172 77 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHC3Q8NDX5 AL356489.2-201ENST00000566968 3528 ntBASIC5.05□□□□□ -1.6
PHC3Q8NDX5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 MTND5P10-201ENST00000603719 1809 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 AC087190.4-201ENST00000574616 8334 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.145-201ENST00000363527 102 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.216-201ENST00000364205 93 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 RNU1-106P-201ENST00000384382 164 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 CISD1P1-201ENST00000393907 327 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 AL139397.2-201ENST00000404529 772 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.04□□□□□ -1.6
PHC3Q8NDX5 U3.36-201ENST00000408418 213 ntBASIC5.04□□□□□ -1.6
PHC3Q8NDX5 AC245054.2-201ENST00000415639 319 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms