Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC011451.2-201ENST00000604303 598 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 BNIP3P10-201ENST00000605360 577 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 AC012360.2-201ENST00000609349 391 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 AC093783.1-201ENST00000612976 329 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 AC027807.2-201ENST00000616099 408 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
USP38Q8NB14 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP38Q8NB14 Z69908.1-201ENST00000622603 247 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.06□□□□□ -1.76
USP38Q8NB14 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP38Q8NB14 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
USP38Q8NB14 AF127577.6-201ENST00000623352 2191 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
USP38Q8NB14 AC006378.2-201ENST00000623178 2476 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP38Q8NB14 AL157700.1-201ENST00000561973 1432 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP38Q8NB14 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP38Q8NB14 RPS4XP5-202ENST00000449995 1334 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.05□□□□□ -1.76
USP38Q8NB14 Y_RNA.97-201ENST00000363094 102 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 RNU4-40P-201ENST00000364351 143 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 RNU6-1074P-201ENST00000383995 104 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 RNU6-1181P-201ENST00000384191 106 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 RNU6-769P-201ENST00000384407 104 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 Y_RNA.548-201ENST00000384656 105 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.05□□□□□ -1.76
USP38Q8NB14 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC098826.1-201ENST00000433943 471 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 RPL21P112-201ENST00000434403 463 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.05□□□□□ -1.76
USP38Q8NB14 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
USP38Q8NB14 AC112653.1-201ENST00000443851 386 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 FAM103A2P-201ENST00000444122 354 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 NPM1P49-201ENST00000448027 714 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC021382.1-201ENST00000483523 359 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC109486.1-201ENST00000486833 374 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.05□□□□□ -1.76
USP38Q8NB14 AC105313.1-201ENST00000509121 353 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC004062.1-201ENST00000509926 645 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC091965.2-201ENST00000512324 613 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 RN7SKP209-201ENST00000516888 304 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.05□□□□□ -1.76
USP38Q8NB14 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.05□□□□□ -1.76
USP38Q8NB14 AC087481.2-201ENST00000565492 330 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.05□□□□□ -1.76
USP38Q8NB14 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.05□□□□□ -1.76
USP38Q8NB14 MIR4325-201ENST00000583049 90 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP38Q8NB14 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.05□□□□□ -1.76
USP38Q8NB14 AL358072.1-201ENST00000604156 575 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 TUG1_1.1-201ENST00000610654 145 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 MIR7112-201ENST00000616126 65 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.05□□□□□ -1.76
USP38Q8NB14 AP000553.6-201ENST00000641242 118 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP38Q8NB14 MTCO1P9-201ENST00000505577 1534 ntBASIC4.05□□□□□ -1.76
USP38Q8NB14 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
USP38Q8NB14 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.05□□□□□ -1.76
USP38Q8NB14 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP38Q8NB14 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP38Q8NB14 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AC004925.1-201ENST00000624256 2706 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AP001148.1-201ENST00000624124 2359 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC092125.1-201ENST00000562568 1995 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP38Q8NB14 FRG1BP-201ENST00000278882 761 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP38Q8NB14 SNORA80A-201ENST00000363922 136 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 Z98941.1-201ENST00000407764 100 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 RPL30P2-201ENST00000414021 291 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.04□□□□□ -1.76
USP38Q8NB14 COTL1P1-201ENST00000422309 375 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC002075.2-201ENST00000425207 252 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AL671855.1-201ENST00000446875 1203 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 MTCO1P42-201ENST00000457379 726 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.04□□□□□ -1.76
USP38Q8NB14 RPL31P3-201ENST00000458430 332 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AC116337.2-201ENST00000477662 156 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC080014.1-201ENST00000496877 1201 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AC005921.1-201ENST00000510589 286 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.04□□□□□ -1.76
USP38Q8NB14 RNU6-1095P-201ENST00000516148 108 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 HIGD1AP10-201ENST00000527837 282 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.04□□□□□ -1.76
USP38Q8NB14 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.04□□□□□ -1.76
USP38Q8NB14 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.04□□□□□ -1.76
USP38Q8NB14 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.04□□□□□ -1.76
USP38Q8NB14 AC091489.2-201ENST00000566263 604 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.04□□□□□ -1.76
USP38Q8NB14 MIR548AB-201ENST00000584917 84 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC006504.3-201ENST00000586818 523 ntBASIC4.04□□□□□ -1.76
USP38Q8NB14 AC008507.1-201ENST00000587506 734 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms