Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL023807.1-201ENST00000407932 359 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AL137014.1-201ENST00000420490 1226 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC108734.1-201ENST00000439549 399 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RPS29P9-201ENST00000440360 171 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AL354714.3-201ENST00000447284 493 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AL353752.1-201ENST00000454946 260 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC091153.1-201ENST00000466297 402 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC114801.2-201ENST00000503825 781 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RN7SKP46-201ENST00000515942 234 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RNU7-51P-201ENST00000516560 62 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 IGHV3-76-201ENST00000522465 295 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC022616.4-201ENST00000522985 181 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC021006.3-201ENST00000530771 192 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 MIR8069-1-201ENST00000616627 86 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 MIR8069-2-201ENST00000621412 86 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 MAPK10-263ENST00000641052 4307 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 MTCO1P24-201ENST00000515438 1558 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 CASC19-284ENST00000642142 1868 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 PROS2P-201ENST00000474651 1951 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF43Q68DV7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF43Q68DV7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF43Q68DV7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF43Q68DV7 SCARNA15-201ENST00000607520 4325 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF43Q68DV7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 RNU6-97P-201ENST00000363387 104 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 RNA5SP505-201ENST00000364748 108 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 SNORD115-7-201ENST00000365306 82 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 RPL31P45-201ENST00000419532 356 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AL590135.1-201ENST00000422215 156 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AL590233.1-201ENST00000430017 456 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 RPS17P8-201ENST00000434525 335 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 RPL21P89-201ENST00000444021 467 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC112492.4-201ENST00000456549 352 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 RN7SL441P-201ENST00000492388 296 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC073073.1-201ENST00000493920 463 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 SETP2-201ENST00000553886 926 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 HSBP1P1-201ENST00000555205 166 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 PARP1P2-201ENST00000556806 195 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 MIR4284-201ENST00000578924 81 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 AL713866.2-201ENST00000603579 219 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC104687.2-201ENST00000604442 342 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AP001486.3-201ENST00000615334 372 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC103858.2-201ENST00000621471 543 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AL357559.1-201ENST00000622228 274 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AP000843.1-201ENST00000624880 701 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 AL606534.2-204ENST00000635008 178 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC022031.1-201ENST00000585985 2593 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF43Q68DV7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF43Q68DV7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF43Q68DV7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF43Q68DV7 AC093591.2-201ENST00000565254 3843 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF43Q68DV7 Z95331.1-201ENST00000623075 23112 ntBASIC5.22□□□□□ -1.57
RNF43Q68DV7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNF43Q68DV7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNF43Q68DV7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
RNF43Q68DV7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF43Q68DV7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF43Q68DV7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF43Q68DV7 AC009902.3-201ENST00000606235 2172 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF43Q68DV7 Y_RNA.234-201ENST00000364409 97 ntBASIC5.21□□□□□ -1.58
RNF43Q68DV7 RNA5SP219-201ENST00000390940 113 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms