Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC105914.1-201ENST00000511798 226 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 FTH1P9-201ENST00000513251 355 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 RNA5SP309-201ENST00000516670 106 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 OR4R1P-201ENST00000529879 463 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AL359212.1-201ENST00000556608 614 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC055876.1-202ENST00000567053 138 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC005951.2-201ENST00000576282 495 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC091953.3-201ENST00000623220 236 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AC019278.1-201ENST00000623516 479 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 AL157786.1-207ENST00000627771 695 ntBASIC4.08□□□□□ -1.76
RNF220Q5VTB9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 OR4G2P-201ENST00000328113 903 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 Y_RNA.22-201ENST00000362492 102 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 MIR514A1-201ENST00000385133 98 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 CALM2P3-201ENST00000400429 449 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 HSPE1P26-201ENST00000405341 275 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 NDUFS5P1-201ENST00000405668 289 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 RNU2-39P-201ENST00000410604 198 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 MIR1911-201ENST00000410783 80 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AL590762.4-201ENST00000425885 253 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC011742.1-201ENST00000431448 434 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 MTATP6P13-201ENST00000438531 667 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 RPL23AP20-201ENST00000447965 421 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AL513533.1-201ENST00000453728 415 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 RPS27AP17-201ENST00000463344 455 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AL049874.1-201ENST00000489560 388 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC009646.1-201ENST00000510455 318 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 RPS3AP4-201ENST00000555161 764 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 MIR4644-201ENST00000579929 84 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC119501.1-201ENST00000603646 475 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC092954.2-201ENST00000609103 430 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 BX323046.1-201ENST00000610145 535 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 MIR6780A-201ENST00000615089 68 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 AC048347.1-201ENST00000624621 427 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 MARK2P15-201ENST00000432204 2186 ntBASIC4.07□□□□□ -1.76
RNF220Q5VTB9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
RNF220Q5VTB9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 BDP1P-201ENST00000582658 1990 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 DEFB109C-201ENST00000382575 264 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 DEFB109B-201ENST00000382656 264 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 RNU6-74P-201ENST00000384235 107 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 MIR1-2-201ENST00000384961 85 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 RN7SKP140-201ENST00000411196 284 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AL356867.1-201ENST00000429623 299 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 HMGB1P12-201ENST00000438594 598 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 HMGB3P12-201ENST00000438745 556 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC020550.1-201ENST00000447385 163 ntBASIC4.06□□□□□ -1.76
RNF220Q5VTB9 AC126389.1-201ENST00000477436 290 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms