Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.46□□□□□ -2.18
TFF3Q07654 AC010733.2-201ENST00000589496 5702 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 RNA5SP189-201ENST00000364920 115 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 Y_RNA.508-201ENST00000384502 114 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TFF3Q07654 AP000275.1-201ENST00000411943 390 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.46□□□□□ -2.18
TFF3Q07654 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.46□□□□□ -2.18
TFF3Q07654 RPS7P2-201ENST00000435134 607 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 LSM1P1-201ENST00000438629 273 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 IPO7P1-201ENST00000442031 636 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TFF3Q07654 TPT1P14-201ENST00000448018 505 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 CLIC4P1-201ENST00000453177 535 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.46□□□□□ -2.18
TFF3Q07654 MRPL42P6-201ENST00000486397 371 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 SNORD59.2-201ENST00000516873 68 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 AP003385.6-201ENST00000531603 374 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.46□□□□□ -2.18
TFF3Q07654 MIR3122-201ENST00000577243 73 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 AC103987.3-201ENST00000582071 292 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 AP001180.3-201ENST00000582221 145 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 AC009318.3-201ENST00000616916 503 ntBASIC1.46□□□□□ -2.18
TFF3Q07654 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TFF3Q07654 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
TFF3Q07654 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.46□□□□□ -2.18
TFF3Q07654 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
TFF3Q07654 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
TFF3Q07654 SNORA25.9-201ENST00000365087 128 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 RNU1-57P-201ENST00000384491 166 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TFF3Q07654 U3.40-201ENST00000408706 208 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.45□□□□□ -2.18
TFF3Q07654 MTCO1P42-201ENST00000457379 726 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 HMGN2P13-201ENST00000476476 274 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 HAUS1P1-201ENST00000505275 832 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.45□□□□□ -2.18
TFF3Q07654 AC087441.2-201ENST00000529141 262 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.45□□□□□ -2.18
TFF3Q07654 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.45□□□□□ -2.18
TFF3Q07654 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.45□□□□□ -2.18
TFF3Q07654 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.45□□□□□ -2.18
TFF3Q07654 AP001542.2-201ENST00000593141 364 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 AC010200.2-201ENST00000605098 235 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 uc_338.5-201ENST00000611839 155 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 AC080100.1-201ENST00000624239 5356 ntBASIC1.45□□□□□ -2.18
TFF3Q07654 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.44□□□□□ -2.18
TFF3Q07654 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TFF3Q07654 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TFF3Q07654 SNORD48-201ENST00000364953 64 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 RNA5SP363-201ENST00000365072 115 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 RPL5P19-201ENST00000404228 893 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC004965.1-201ENST00000413033 213 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.44□□□□□ -2.18
TFF3Q07654 HMGB3P10-201ENST00000434734 572 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 UBE2FP3-201ENST00000436366 524 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.44□□□□□ -2.18
TFF3Q07654 BX322784.1-201ENST00000455793 1077 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC092798.1-201ENST00000458542 409 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.44□□□□□ -2.18
TFF3Q07654 MTCO1P47-201ENST00000523889 1271 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.44□□□□□ -2.18
TFF3Q07654 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.44□□□□□ -2.18
TFF3Q07654 AC104581.2-201ENST00000572227 430 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
TFF3Q07654 AC090897.2-201ENST00000581715 130 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.44□□□□□ -2.18
TFF3Q07654 MTND4P23-201ENST00000447723 1363 ntBASIC1.44□□□□□ -2.18
TFF3Q07654 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 AL354685.2-201ENST00000448218 1447 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TFF3Q07654 Y_RNA.796-201ENST00000364268 102 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 RNU6-392P-201ENST00000364926 101 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 Y_RNA.799-201ENST00000364992 102 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 Y_RNA.355-201ENST00000365462 98 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 TAS2R15P-201ENST00000390674 928 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 MCTS2P-201ENST00000394552 546 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 RNU2-25P-201ENST00000411041 191 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 AC013404.1-201ENST00000413068 249 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 AL136380.1-201ENST00000447970 162 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 SSXP4-201ENST00000451349 245 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.43□□□□□ -2.18
TFF3Q07654 RBM43P1-201ENST00000476891 1081 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 AC069528.1-202ENST00000482888 637 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.43□□□□□ -2.18
TFF3Q07654 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.43□□□□□ -2.18
TFF3Q07654 MIR4512-201ENST00000583257 77 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 AL109653.1-201ENST00000603091 248 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms