Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.6□□□□□ -1.99
VSX2P58304 AC008277.2-201ENST00000605196 797 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AC005046.1-201ENST00000608515 625 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AC253576.2-201ENST00000618815 580 ntBASIC2.6□□□□□ -1.99
VSX2P58304 AL158163.2-201ENST00000619110 700 ntBASIC2.6□□□□□ -1.99
VSX2P58304 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VSX2P58304 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.6□□□□□ -1.99
VSX2P58304 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VSX2P58304 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VSX2P58304 AC006378.2-201ENST00000623178 2476 ntBASIC2.59□□□□□ -1.99
VSX2P58304 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VSX2P58304 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
VSX2P58304 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VSX2P58304 AL360182.1-201ENST00000397433 468 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AL512633.1-201ENST00000399931 655 ntBASIC2.59□□□□□ -1.99
VSX2P58304 MTND4P13-201ENST00000402078 1023 ntBASIC2.59□□□□□ -1.99
VSX2P58304 RNU2-52P-201ENST00000410680 190 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AL161449.1-201ENST00000414531 1199 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.59□□□□□ -1.99
VSX2P58304 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.59□□□□□ -1.99
VSX2P58304 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.59□□□□□ -1.99
VSX2P58304 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.59□□□□□ -1.99
VSX2P58304 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.59□□□□□ -1.99
VSX2P58304 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.59□□□□□ -1.99
VSX2P58304 Z96811.1-201ENST00000445880 108 ntBASIC2.59□□□□□ -1.99
VSX2P58304 RPL23AP11-201ENST00000475260 469 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.59□□□□□ -1.99
VSX2P58304 RPL21P131-201ENST00000497298 483 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AC016550.1-201ENST00000505348 785 ntBASIC2.59□□□□□ -1.99
VSX2P58304 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.59□□□□□ -1.99
VSX2P58304 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VSX2P58304 AC022690.1-201ENST00000526681 550 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AC087276.1-201ENST00000529659 480 ntBASIC2.59□□□□□ -1.99
VSX2P58304 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.59□□□□□ -1.99
VSX2P58304 ELOCP31-201ENST00000540463 467 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.59□□□□□ -1.99
VSX2P58304 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.59□□□□□ -1.99
VSX2P58304 AC007954.1-201ENST00000554198 494 ntBASIC2.59□□□□□ -1.99
VSX2P58304 OR4K8P-201ENST00000578842 1048 ntBASIC2.59□□□□□ -1.99
VSX2P58304 MIR3162-201ENST00000581818 82 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AL022099.1-201ENST00000604551 712 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AC008962.1-201ENST00000605729 304 ntBASIC2.59□□□□□ -1.99
VSX2P58304 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.59□□□□□ -1.99
VSX2P58304 AC009237.15-201ENST00000610252 501 ntBASIC2.59□□□□□ -1.99
VSX2P58304 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VSX2P58304 AP003485.2-201ENST00000623636 610 ntBASIC2.59□□□□□ -1.99
VSX2P58304 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.59□□□□□ -1.99
VSX2P58304 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.59□□□□□ -1.99
VSX2P58304 MKKS-204ENST00000639674 192 ntBASIC2.59□□□□□ -1.99
VSX2P58304 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VSX2P58304 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VSX2P58304 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
VSX2P58304 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 GABRG2-229ENST00000641017 3628 ntBASIC2.58□□□□□ -2
VSX2P58304 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VSX2P58304 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VSX2P58304 SNRPEP3-201ENST00000338402 276 ntBASIC2.58□□□□□ -2
VSX2P58304 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.58□□□□□ -2
VSX2P58304 MIR9-1-201ENST00000385198 89 ntBASIC2.58□□□□□ -2
VSX2P58304 RNU2-42P-201ENST00000410697 113 ntBASIC2.58□□□□□ -2
VSX2P58304 RNA5SP184-201ENST00000411071 108 ntBASIC2.58□□□□□ -2
VSX2P58304 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
VSX2P58304 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.58□□□□□ -2
VSX2P58304 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 AC007742.1-201ENST00000425789 329 ntBASIC2.58□□□□□ -2
VSX2P58304 AC063976.3-201ENST00000426849 329 ntBASIC2.58□□□□□ -2
VSX2P58304 MTATP6P4-201ENST00000427725 675 ntBASIC2.58□□□□□ -2
VSX2P58304 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.58□□□□□ -2
VSX2P58304 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
VSX2P58304 ELOCP26-201ENST00000436067 329 ntBASIC2.58□□□□□ -2
VSX2P58304 UBBP3-201ENST00000445497 241 ntBASIC2.58□□□□□ -2
VSX2P58304 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.58□□□□□ -2
VSX2P58304 Z82190.1-201ENST00000454534 490 ntBASIC2.58□□□□□ -2
VSX2P58304 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.58□□□□□ -2
VSX2P58304 SNORA31.1-201ENST00000515993 133 ntBASIC2.58□□□□□ -2
VSX2P58304 SNORA19.3-201ENST00000516165 130 ntBASIC2.58□□□□□ -2
VSX2P58304 SNORA31.5-201ENST00000516190 133 ntBASIC2.58□□□□□ -2
VSX2P58304 RN7SKP31-201ENST00000516354 278 ntBASIC2.58□□□□□ -2
VSX2P58304 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
VSX2P58304 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.58□□□□□ -2
VSX2P58304 DEFB130C-202ENST00000530001 230 ntBASIC2.58□□□□□ -2
VSX2P58304 AC068339.2-201ENST00000534395 618 ntBASIC2.58□□□□□ -2
VSX2P58304 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.58□□□□□ -2
VSX2P58304 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.58□□□□□ -2
VSX2P58304 AC090695.1-201ENST00000561269 1222 ntBASIC2.58□□□□□ -2
VSX2P58304 MIR4298-201ENST00000584380 73 ntBASIC2.58□□□□□ -2
VSX2P58304 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 AC245036.5-201ENST00000596330 847 ntBASIC2.58□□□□□ -2
VSX2P58304 AP000787.2-201ENST00000604432 568 ntBASIC2.58□□□□□ -2
VSX2P58304 AC010738.1-201ENST00000604970 987 ntBASIC2.58□□□□□ -2
VSX2P58304 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.58□□□□□ -2
VSX2P58304 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.58□□□□□ -2
VSX2P58304 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
VSX2P58304 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
VSX2P58304 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms