Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC234781.2-201ENST00000426370 994 ntBASIC2.78□□□□□ -1.96
CDH6P55285 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 MTND2P5-201ENST00000432656 1006 ntBASIC2.78□□□□□ -1.96
CDH6P55285 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH6P55285 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 MTCYBP11-201ENST00000447254 1109 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AIG1P1-201ENST00000503376 148 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AC093801.2-201ENST00000503966 1050 ntBASIC2.78□□□□□ -1.96
CDH6P55285 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.78□□□□□ -1.96
CDH6P55285 GMPSP1-201ENST00000514075 579 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AC104417.1-201ENST00000523974 751 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AP000867.2-201ENST00000532468 320 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AC024224.1-201ENST00000538284 609 ntBASIC2.78□□□□□ -1.96
CDH6P55285 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 AC125611.1-201ENST00000549563 229 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH6P55285 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH6P55285 ELOCP29-201ENST00000588193 334 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AL133507.1-201ENST00000605269 557 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AC010975.3-201ENST00000618727 978 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AC004009.2-201ENST00000623016 728 ntBASIC2.78□□□□□ -1.96
CDH6P55285 AC010872.1-201ENST00000624225 675 ntBASIC2.78□□□□□ -1.96
CDH6P55285 MKKS-204ENST00000639674 192 ntBASIC2.78□□□□□ -1.96
CDH6P55285 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CDH6P55285 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CDH6P55285 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH6P55285 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CDH6P55285 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
CDH6P55285 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH6P55285 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH6P55285 RNU6-707P-201ENST00000364647 95 ntBASIC2.77□□□□□ -1.97
CDH6P55285 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 BTF3P8-201ENST00000414577 526 ntBASIC2.77□□□□□ -1.97
CDH6P55285 COTL1P1-201ENST00000422309 375 ntBASIC2.77□□□□□ -1.97
CDH6P55285 SEPT7P5-201ENST00000434048 306 ntBASIC2.77□□□□□ -1.97
CDH6P55285 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 AL592447.1-201ENST00000447592 540 ntBASIC2.77□□□□□ -1.97
CDH6P55285 SNRPGP6-201ENST00000451124 220 ntBASIC2.77□□□□□ -1.97
CDH6P55285 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 GSTA11P-201ENST00000452866 669 ntBASIC2.77□□□□□ -1.97
CDH6P55285 AC026410.2-201ENST00000460281 156 ntBASIC2.77□□□□□ -1.97
CDH6P55285 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH6P55285 OR4G11P-201ENST00000492842 939 ntBASIC2.77□□□□□ -1.97
CDH6P55285 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 MTCO3P27-201ENST00000514397 196 ntBASIC2.77□□□□□ -1.97
CDH6P55285 SNORA31.21-201ENST00000517180 77 ntBASIC2.77□□□□□ -1.97
CDH6P55285 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH6P55285 MTCO3P15-201ENST00000526563 574 ntBASIC2.77□□□□□ -1.97
CDH6P55285 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 ELOCP31-201ENST00000540463 467 ntBASIC2.77□□□□□ -1.97
CDH6P55285 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH6P55285 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH6P55285 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH6P55285 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH6P55285 AC079089.3-201ENST00000603094 673 ntBASIC2.77□□□□□ -1.97
CDH6P55285 AC019159.1-201ENST00000605094 187 ntBASIC2.77□□□□□ -1.97
CDH6P55285 AC011330.2-201ENST00000621680 635 ntBASIC2.77□□□□□ -1.97
CDH6P55285 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH6P55285 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.77□□□□□ -1.97
CDH6P55285 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CDH6P55285 AC138915.1-201ENST00000565427 1685 ntBASIC2.76□□□□□ -1.97
CDH6P55285 RNU6-1180P-201ENST00000364935 107 ntBASIC2.76□□□□□ -1.97
CDH6P55285 SNORD21-201ENST00000383953 95 ntBASIC2.76□□□□□ -1.97
CDH6P55285 RNU6-1197P-201ENST00000391183 107 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AL356131.1-201ENST00000405826 414 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC019070.1-201ENST00000415008 1024 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH6P55285 HMGN2P30-201ENST00000423237 256 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 MTCO1P3-201ENST00000429327 192 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC093155.1-201ENST00000440164 826 ntBASIC2.76□□□□□ -1.97
CDH6P55285 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
CDH6P55285 RPL39P6-201ENST00000448289 150 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC010099.1-201ENST00000455434 375 ntBASIC2.76□□□□□ -1.97
CDH6P55285 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 AL049714.1-201ENST00000466686 347 ntBASIC2.76□□□□□ -1.97
CDH6P55285 NAMPTP2-201ENST00000505629 1115 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC113420.1-201ENST00000507903 571 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC008837.1-201ENST00000511513 412 ntBASIC2.76□□□□□ -1.97
CDH6P55285 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH6P55285 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 AC100870.1-201ENST00000522035 505 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC087373.1-201ENST00000524920 491 ntBASIC2.76□□□□□ -1.97
CDH6P55285 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH6P55285 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH6P55285 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH6P55285 AC138915.2-201ENST00000569776 97 ntBASIC2.76□□□□□ -1.97
CDH6P55285 LARP7P3-201ENST00000579888 337 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC138761.3-201ENST00000579993 334 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms