Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
APOC4P55056 AC007656.2-201ENST00000624902 4547 ntBASIC2.54□□□□□ -2
APOC4P55056 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
APOC4P55056 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 DEFB108F-201ENST00000344638 222 ntBASIC2.54□□□□□ -2
APOC4P55056 RNU4-35P-201ENST00000362588 141 ntBASIC2.54□□□□□ -2
APOC4P55056 RNU6-97P-201ENST00000363387 104 ntBASIC2.54□□□□□ -2
APOC4P55056 RNU1-33P-201ENST00000364249 162 ntBASIC2.54□□□□□ -2
APOC4P55056 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.54□□□□□ -2
APOC4P55056 RPS4XP3-201ENST00000398541 413 ntBASIC2.54□□□□□ -2
APOC4P55056 RPS3AP24-201ENST00000407896 734 ntBASIC2.54□□□□□ -2
APOC4P55056 RNA5SP38-201ENST00000410750 119 ntBASIC2.54□□□□□ -2
APOC4P55056 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.54□□□□□ -2
APOC4P55056 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.54□□□□□ -2
APOC4P55056 CCDC58P2-201ENST00000417131 366 ntBASIC2.54□□□□□ -2
APOC4P55056 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.54□□□□□ -2
APOC4P55056 ATP5JP1-201ENST00000431631 322 ntBASIC2.54□□□□□ -2
APOC4P55056 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.54□□□□□ -2
APOC4P55056 AC024082.2-201ENST00000434771 238 ntBASIC2.54□□□□□ -2
APOC4P55056 AC090774.1-201ENST00000435925 246 ntBASIC2.54□□□□□ -2
APOC4P55056 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 OR6C5P-201ENST00000452388 923 ntBASIC2.54□□□□□ -2
APOC4P55056 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 snoU13.22-201ENST00000459428 104 ntBASIC2.54□□□□□ -2
APOC4P55056 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 RPL7P5-201ENST00000471472 736 ntBASIC2.54□□□□□ -2
APOC4P55056 AC004263.1-201ENST00000479327 332 ntBASIC2.54□□□□□ -2
APOC4P55056 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.54□□□□□ -2
APOC4P55056 AC110794.1-201ENST00000505816 425 ntBASIC2.54□□□□□ -2
APOC4P55056 AC111000.2-201ENST00000507775 550 ntBASIC2.54□□□□□ -2
APOC4P55056 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.54□□□□□ -2
APOC4P55056 PHBP14-201ENST00000512887 367 ntBASIC2.54□□□□□ -2
APOC4P55056 SNORA70.16-201ENST00000516390 95 ntBASIC2.54□□□□□ -2
APOC4P55056 SNORA70.19-201ENST00000516717 90 ntBASIC2.54□□□□□ -2
APOC4P55056 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.54□□□□□ -2
APOC4P55056 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.54□□□□□ -2
APOC4P55056 DEFB108D-201ENST00000527787 222 ntBASIC2.54□□□□□ -2
APOC4P55056 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.54□□□□□ -2
APOC4P55056 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.54□□□□□ -2
APOC4P55056 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.54□□□□□ -2
APOC4P55056 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.54□□□□□ -2
APOC4P55056 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 AC002400.1-201ENST00000569310 726 ntBASIC2.54□□□□□ -2
APOC4P55056 MIR3921-201ENST00000577308 85 ntBASIC2.54□□□□□ -2
APOC4P55056 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 AP001429.1-201ENST00000602568 530 ntBASIC2.54□□□□□ -2
APOC4P55056 AP000811.1-201ENST00000603803 651 ntBASIC2.54□□□□□ -2
APOC4P55056 AC097468.3-201ENST00000607956 456 ntBASIC2.54□□□□□ -2
APOC4P55056 AP002826.1-201ENST00000608835 315 ntBASIC2.54□□□□□ -2
APOC4P55056 AC072039.2-201ENST00000608883 439 ntBASIC2.54□□□□□ -2
APOC4P55056 MIR6130-201ENST00000619419 109 ntBASIC2.54□□□□□ -2
APOC4P55056 AL031667.3-201ENST00000620124 655 ntBASIC2.54□□□□□ -2
APOC4P55056 AP000770.2-201ENST00000623694 100 ntBASIC2.54□□□□□ -2
APOC4P55056 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.54□□□□□ -2
APOC4P55056 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.54□□□□□ -2
APOC4P55056 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 SRP72P2-201ENST00000344851 1979 ntBASIC2.54□□□□□ -2
APOC4P55056 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOC4P55056 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
APOC4P55056 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
APOC4P55056 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOC4P55056 AC073346.2-201ENST00000624724 2058 ntBASIC2.53□□□□□ -2
APOC4P55056 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.53□□□□□ -2
APOC4P55056 Y_RNA.302-201ENST00000364997 102 ntBASIC2.53□□□□□ -2
APOC4P55056 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOC4P55056 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOC4P55056 AL590084.2-201ENST00000401481 382 ntBASIC2.53□□□□□ -2
APOC4P55056 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOC4P55056 MTCO1P17-201ENST00000411522 491 ntBASIC2.53□□□□□ -2
APOC4P55056 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.53□□□□□ -2
APOC4P55056 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.53□□□□□ -2
APOC4P55056 AC011233.1-201ENST00000422812 283 ntBASIC2.53□□□□□ -2
APOC4P55056 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.53□□□□□ -2
APOC4P55056 AL593851.1-201ENST00000426171 157 ntBASIC2.53□□□□□ -2
APOC4P55056 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.53□□□□□ -2
APOC4P55056 AC097713.2-201ENST00000430199 356 ntBASIC2.53□□□□□ -2
APOC4P55056 OR4K11P-201ENST00000431829 904 ntBASIC2.53□□□□□ -2
APOC4P55056 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.53□□□□□ -2
APOC4P55056 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.53□□□□□ -2
APOC4P55056 UBE2FP3-201ENST00000436366 524 ntBASIC2.53□□□□□ -2
APOC4P55056 SKP1P1-201ENST00000438081 489 ntBASIC2.53□□□□□ -2
APOC4P55056 AC006028.1-201ENST00000438379 402 ntBASIC2.53□□□□□ -2
APOC4P55056 RPL26P6-201ENST00000440913 438 ntBASIC2.53□□□□□ -2
APOC4P55056 AL591503.2-201ENST00000442314 1005 ntBASIC2.53□□□□□ -2
APOC4P55056 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.53□□□□□ -2
APOC4P55056 AL357552.1-201ENST00000445254 415 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms