Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC008885.1-201ENST00000514930 301 ntBASIC2.12□□□□□ -2.07
CDC34P49427 AP002748.2-201ENST00000528671 348 ntBASIC2.12□□□□□ -2.07
CDC34P49427 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
CDC34P49427 AL391261.3-201ENST00000557194 520 ntBASIC2.12□□□□□ -2.07
CDC34P49427 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.12□□□□□ -2.07
CDC34P49427 AC104229.1-201ENST00000561364 255 ntBASIC2.12□□□□□ -2.07
CDC34P49427 MIR3160-1-201ENST00000577972 85 ntBASIC2.12□□□□□ -2.07
CDC34P49427 MIR4635-201ENST00000583759 79 ntBASIC2.12□□□□□ -2.07
CDC34P49427 AC107214.2-201ENST00000608204 634 ntBASIC2.12□□□□□ -2.07
CDC34P49427 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.12□□□□□ -2.07
CDC34P49427 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CDC34P49427 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
CDC34P49427 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CDC34P49427 AC073346.2-201ENST00000624724 2058 ntBASIC2.11□□□□□ -2.07
CDC34P49427 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CDC34P49427 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDC34P49427 SNORA63.1-201ENST00000362493 131 ntBASIC2.11□□□□□ -2.07
CDC34P49427 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDC34P49427 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDC34P49427 RNU6-220P-201ENST00000390919 107 ntBASIC2.11□□□□□ -2.07
CDC34P49427 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC34P49427 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC34P49427 CR848007.2-201ENST00000424918 787 ntBASIC2.11□□□□□ -2.07
CDC34P49427 RPS12P2-201ENST00000439728 269 ntBASIC2.11□□□□□ -2.07
CDC34P49427 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC34P49427 CYCSP32-201ENST00000440548 321 ntBASIC2.11□□□□□ -2.07
CDC34P49427 AL049734.2-201ENST00000441066 616 ntBASIC2.11□□□□□ -2.07
CDC34P49427 RNFT1P2-201ENST00000443064 757 ntBASIC2.11□□□□□ -2.07
CDC34P49427 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC34P49427 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC34P49427 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDC34P49427 AC092757.1-201ENST00000467293 467 ntBASIC2.11□□□□□ -2.07
CDC34P49427 RPS3AP43-201ENST00000479743 781 ntBASIC2.11□□□□□ -2.07
CDC34P49427 RPS27P27-201ENST00000498779 255 ntBASIC2.11□□□□□ -2.07
CDC34P49427 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC34P49427 XKRY-201ENST00000510392 1100 ntBASIC2.11□□□□□ -2.07
CDC34P49427 SCARNA17.1-201ENST00000516211 143 ntBASIC2.11□□□□□ -2.07
CDC34P49427 SCARNA17.2-201ENST00000516334 143 ntBASIC2.11□□□□□ -2.07
CDC34P49427 RNU1-45P-201ENST00000517191 141 ntBASIC2.11□□□□□ -2.07
CDC34P49427 AC009812.2-201ENST00000517657 457 ntBASIC2.11□□□□□ -2.07
CDC34P49427 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDC34P49427 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDC34P49427 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDC34P49427 AC123904.3-201ENST00000547218 814 ntBASIC2.11□□□□□ -2.07
CDC34P49427 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC34P49427 AC133794.1-201ENST00000602731 914 ntBASIC2.11□□□□□ -2.07
CDC34P49427 AC021749.1-201ENST00000604322 607 ntBASIC2.11□□□□□ -2.07
CDC34P49427 AC080013.4-201ENST00000607624 649 ntBASIC2.11□□□□□ -2.07
CDC34P49427 DUXAP10-204ENST00000612052 616 ntBASIC2.11□□□□□ -2.07
CDC34P49427 SCARNA17.4-201ENST00000614296 143 ntBASIC2.11□□□□□ -2.07
CDC34P49427 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDC34P49427 AC109315.1-201ENST00000584143 1347 ntBASIC2.11□□□□□ -2.07
CDC34P49427 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
CDC34P49427 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.1□□□□□ -2.07
CDC34P49427 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CDC34P49427 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDC34P49427 RNU1-100P-201ENST00000365255 165 ntBASIC2.1□□□□□ -2.07
CDC34P49427 MIR554-201ENST00000384874 96 ntBASIC2.1□□□□□ -2.07
CDC34P49427 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDC34P49427 NPM1P11-201ENST00000417106 855 ntBASIC2.1□□□□□ -2.07
CDC34P49427 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.1□□□□□ -2.07
CDC34P49427 PSMA6P3-201ENST00000428242 164 ntBASIC2.1□□□□□ -2.07
CDC34P49427 OR10R1P-201ENST00000441524 1141 ntBASIC2.1□□□□□ -2.07
CDC34P49427 PIGFP3-201ENST00000441918 722 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AC112653.1-201ENST00000443851 386 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC34P49427 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC34P49427 PDSS1P2-201ENST00000449397 678 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AC112492.1-201ENST00000449607 712 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC34P49427 AC138853.1-201ENST00000503549 823 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AC083906.5-201ENST00000503722 328 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC34P49427 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC34P49427 SNORA74D-201ENST00000516404 141 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AC100870.1-201ENST00000522035 505 ntBASIC2.1□□□□□ -2.07
CDC34P49427 CYCSP26-201ENST00000534107 320 ntBASIC2.1□□□□□ -2.07
CDC34P49427 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CDC34P49427 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC34P49427 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
CDC34P49427 MIR5092-201ENST00000583139 88 ntBASIC2.1□□□□□ -2.07
CDC34P49427 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.1□□□□□ -2.07
CDC34P49427 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.1□□□□□ -2.07
CDC34P49427 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.1□□□□□ -2.07
CDC34P49427 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.1□□□□□ -2.07
CDC34P49427 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CDC34P49427 AC000403.1-201ENST00000613696 3585 ntBASIC2.1□□□□□ -2.07
CDC34P49427 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.1□□□□□ -2.07
CDC34P49427 AC005832.2-201ENST00000538921 1430 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.09□□□□□ -2.07
CDC34P49427 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDC34P49427 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDC34P49427 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
CDC34P49427 RNU6-582P-201ENST00000362989 107 ntBASIC2.09□□□□□ -2.07
CDC34P49427 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDC34P49427 RNU6-76P-201ENST00000384060 104 ntBASIC2.09□□□□□ -2.07
CDC34P49427 SNORD65C-201ENST00000390962 71 ntBASIC2.09□□□□□ -2.07
CDC34P49427 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.09□□□□□ -2.07
CDC34P49427 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.09□□□□□ -2.07
CDC34P49427 AL139132.1-201ENST00000431587 344 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms