Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.69□□□□□ -1.98
RFX3P48380 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX3P48380 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX3P48380 AL157394.1-201ENST00000562983 1224 ntBASIC2.69□□□□□ -1.98
RFX3P48380 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFX3P48380 MTCO3P13-201ENST00000577757 781 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX3P48380 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX3P48380 AC011471.1-201ENST00000585766 187 ntBASIC2.69□□□□□ -1.98
RFX3P48380 DUXAP4-201ENST00000603046 613 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AL020991.1-201ENST00000612314 373 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC107871.2-201ENST00000612894 502 ntBASIC2.69□□□□□ -1.98
RFX3P48380 Z99129.2-201ENST00000619967 314 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC106858.1-201ENST00000637497 429 ntBASIC2.69□□□□□ -1.98
RFX3P48380 AC107982.1-201ENST00000507171 1300 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX3P48380 SNRPEP3-201ENST00000338402 276 ntBASIC2.68□□□□□ -1.98
RFX3P48380 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFX3P48380 DEFB108F-201ENST00000344638 222 ntBASIC2.68□□□□□ -1.98
RFX3P48380 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
RFX3P48380 RNU6-1197P-201ENST00000391183 107 ntBASIC2.68□□□□□ -1.98
RFX3P48380 RNU2-43P-201ENST00000410306 190 ntBASIC2.68□□□□□ -1.98
RFX3P48380 RPL7P8-201ENST00000411964 730 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
RFX3P48380 AL451074.5-201ENST00000415894 435 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AL356320.2-201ENST00000417263 507 ntBASIC2.68□□□□□ -1.98
RFX3P48380 RPL7P10-201ENST00000417407 739 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AL139281.1-201ENST00000422120 335 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AC019178.2-201ENST00000423595 505 ntBASIC2.68□□□□□ -1.98
RFX3P48380 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.68□□□□□ -1.98
RFX3P48380 RPL27AP8-201ENST00000424277 446 ntBASIC2.68□□□□□ -1.98
RFX3P48380 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.68□□□□□ -1.98
RFX3P48380 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX3P48380 RPL26P6-201ENST00000440913 438 ntBASIC2.68□□□□□ -1.98
RFX3P48380 COX6CP2-201ENST00000444980 225 ntBASIC2.68□□□□□ -1.98
RFX3P48380 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX3P48380 RPL39P6-201ENST00000448289 150 ntBASIC2.68□□□□□ -1.98
RFX3P48380 SUMO2P2-201ENST00000456482 255 ntBASIC2.68□□□□□ -1.98
RFX3P48380 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX3P48380 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX3P48380 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX3P48380 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX3P48380 AC112206.4-201ENST00000515142 405 ntBASIC2.68□□□□□ -1.98
RFX3P48380 DEFB108D-201ENST00000527787 222 ntBASIC2.68□□□□□ -1.98
RFX3P48380 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFX3P48380 AC118942.1-201ENST00000529674 1035 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.68□□□□□ -1.98
RFX3P48380 OR7K1P-201ENST00000546439 926 ntBASIC2.68□□□□□ -1.98
RFX3P48380 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.68□□□□□ -1.98
RFX3P48380 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX3P48380 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.68□□□□□ -1.98
RFX3P48380 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX3P48380 MIR3609-201ENST00000582661 80 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AC006504.3-201ENST00000586818 523 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AC105224.1-201ENST00000587055 421 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AL606834.3-201ENST00000602615 496 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AL133507.1-201ENST00000605269 557 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AC080013.4-201ENST00000607624 649 ntBASIC2.68□□□□□ -1.98
RFX3P48380 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX3P48380 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX3P48380 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFX3P48380 AC012321.1-201ENST00000561622 1588 ntBASIC2.67□□□□□ -1.98
RFX3P48380 ZNF833P-201ENST00000424938 1494 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC008568.2-201ENST00000623862 2313 ntBASIC2.67□□□□□ -1.98
RFX3P48380 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFX3P48380 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RFX3P48380 RNU1-140P-201ENST00000365040 165 ntBASIC2.67□□□□□ -1.98
RFX3P48380 U8.9-201ENST00000365667 134 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AL356131.1-201ENST00000405826 414 ntBASIC2.67□□□□□ -1.98
RFX3P48380 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
RFX3P48380 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX3P48380 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 AC109583.1-201ENST00000432156 268 ntBASIC2.67□□□□□ -1.98
RFX3P48380 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 RPL39P40-201ENST00000445481 146 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 AC026410.2-201ENST00000460281 156 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AL049714.1-201ENST00000466686 347 ntBASIC2.67□□□□□ -1.98
RFX3P48380 RPS15AP17-201ENST00000470598 390 ntBASIC2.67□□□□□ -1.98
RFX3P48380 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 VN1R104P-201ENST00000505115 1009 ntBASIC2.67□□□□□ -1.98
RFX3P48380 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 AC010374.2-201ENST00000512933 535 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX3P48380 RNU6-798P-201ENST00000516912 103 ntBASIC2.67□□□□□ -1.98
RFX3P48380 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.67□□□□□ -1.98
RFX3P48380 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 HSPA8P13-201ENST00000523715 472 ntBASIC2.67□□□□□ -1.98
RFX3P48380 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 AC107016.2-201ENST00000547968 190 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 NBEAP1-201ENST00000554452 979 ntBASIC2.67□□□□□ -1.98
RFX3P48380 HSPE1P3-201ENST00000559254 309 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX3P48380 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.67□□□□□ -1.98
RFX3P48380 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.67□□□□□ -1.98
RFX3P48380 AC024257.5-201ENST00000612739 531 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms