Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CLIP1P30622 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLIP1P30622 AL139276.1-201ENST00000311910 1001 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 RNA5SP189-201ENST00000364920 115 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 BX682237.1-201ENST00000415016 335 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 RPS3AP9-201ENST00000417027 792 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP1P30622 HMGN2P13-201ENST00000476476 274 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP1P30622 SNORD53B-201ENST00000577887 78 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CLIP1P30622 AC004520.1-201ENST00000608362 1413 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLIP1P30622 AC090740.1-201ENST00000623193 2262 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.51□□□□□ -2.01
CLIP1P30622 UBBP3-201ENST00000445497 241 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 HMGN1P8-201ENST00000463578 288 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP1P30622 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 PTP4A1P6-201ENST00000531034 478 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.51□□□□□ -2.01
CLIP1P30622 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
CLIP1P30622 AL589994.2-201ENST00000621124 579 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 uc_338.20-201ENST00000621563 178 ntBASIC2.51□□□□□ -2.01
CLIP1P30622 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLIP1P30622 Y_RNA.116-201ENST00000363292 103 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 SNORA25.9-201ENST00000365087 128 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.5□□□□□ -2.01
CLIP1P30622 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLIP1P30622 HMGN2P38-201ENST00000423806 265 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.5□□□□□ -2.01
CLIP1P30622 Z96811.1-201ENST00000445880 108 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.5□□□□□ -2.01
CLIP1P30622 MIR5694-201ENST00000581190 76 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 AC068944.2-201ENST00000610373 403 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 MIR6895-201ENST00000613497 78 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.5□□□□□ -2.01
CLIP1P30622 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLIP1P30622 AC006026.1-201ENST00000444025 1803 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.49□□□□□ -2.01
CLIP1P30622 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLIP1P30622 AP002907.1-201ENST00000606361 1430 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 MTND4P34-201ENST00000572715 1371 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 RNU6-392P-201ENST00000364926 101 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 FO393413.1-201ENST00000402892 195 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.49□□□□□ -2.01
CLIP1P30622 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLIP1P30622 AC135721.1-201ENST00000497954 479 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 OR4V1P-201ENST00000525394 1140 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 AP000790.1-201ENST00000528891 737 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.49□□□□□ -2.01
CLIP1P30622 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP1P30622 SNORD39.2-201ENST00000579995 76 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 AP001542.2-201ENST00000593141 364 ntBASIC2.49□□□□□ -2.01
CLIP1P30622 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP1P30622 AL157700.1-201ENST00000561973 1432 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 AC002546.1-201ENST00000588041 2504 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 MIR518E-201ENST00000385252 88 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 ANAPC10P1-201ENST00000395991 556 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP1P30622 PPP1R2P5-201ENST00000457256 603 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP1P30622 AC087441.2-201ENST00000529141 262 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 AP003385.6-201ENST00000531603 374 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 APOOP1-201ENST00000604695 592 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.48□□□□□ -2.01
CLIP1P30622 PABPC1P9-201ENST00000426076 1612 ntBASIC2.47□□□□□ -2.01
CLIP1P30622 RNU6-60P-201ENST00000364792 103 ntBASIC2.47□□□□□ -2.01
CLIP1P30622 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.47□□□□□ -2.01
CLIP1P30622 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLIP1P30622 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.47□□□□□ -2.01
CLIP1P30622 AC140725.3-201ENST00000616193 880 ntBASIC2.47□□□□□ -2.01
CLIP1P30622 AL136164.4-201ENST00000625013 2135 ntBASIC2.47□□□□□ -2.01
CLIP1P30622 AL391987.6-201ENST00000305671 199 ntBASIC2.46□□□□□ -2.02
CLIP1P30622 POLHP1-201ENST00000411806 470 ntBASIC2.46□□□□□ -2.02
CLIP1P30622 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.46□□□□□ -2.02
CLIP1P30622 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP1P30622 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP1P30622 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP1P30622 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP1P30622 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP1P30622 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP1P30622 AC006249.1-201ENST00000621223 471 ntBASIC2.46□□□□□ -2.02
CLIP1P30622 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP1P30622 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP1P30622 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLIP1P30622 RNU6-174P-201ENST00000410406 106 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 AC013404.1-201ENST00000413068 249 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 RPL31P2-201ENST00000413849 377 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP1P30622 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.45□□□□□ -2.02
CLIP1P30622 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.45□□□□□ -2.02
CLIP1P30622 HSFY3P-201ENST00000444242 1191 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 SSXP4-201ENST00000451349 245 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 SNRPGP9-201ENST00000456025 225 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 MTCO1P42-201ENST00000457379 726 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 AC092798.1-201ENST00000458542 409 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 AC104472.2-201ENST00000469035 601 ntBASIC2.45□□□□□ -2.02
CLIP1P30622 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms