Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.21□□□□□ -1.74
CD40P25942 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CD40P25942 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CD40P25942 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 LINC01355-201ENST00000566551 5444 ntBASIC4.2□□□□□ -1.74
CD40P25942 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 MAPK10-328ENST00000641553 4009 ntBASIC4.2□□□□□ -1.74
CD40P25942 RNA5SP443-201ENST00000363083 132 ntBASIC4.2□□□□□ -1.74
CD40P25942 SNORD113-7-201ENST00000363762 77 ntBASIC4.2□□□□□ -1.74
CD40P25942 Y_RNA.301-201ENST00000364990 103 ntBASIC4.2□□□□□ -1.74
CD40P25942 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CD40P25942 XGY1-201ENST00000381172 446 ntBASIC4.2□□□□□ -1.74
CD40P25942 RNU6-393P-201ENST00000384475 107 ntBASIC4.2□□□□□ -1.74
CD40P25942 MIR192-201ENST00000384915 110 ntBASIC4.2□□□□□ -1.74
CD40P25942 MIR514A1-201ENST00000385133 98 ntBASIC4.2□□□□□ -1.74
CD40P25942 SNORA16.2-201ENST00000390991 127 ntBASIC4.2□□□□□ -1.74
CD40P25942 MIR298-201ENST00000401212 88 ntBASIC4.2□□□□□ -1.74
CD40P25942 LAP3P1-201ENST00000403648 294 ntBASIC4.2□□□□□ -1.74
CD40P25942 AC080125.1-201ENST00000414888 684 ntBASIC4.2□□□□□ -1.74
CD40P25942 BX510359.2-201ENST00000417920 305 ntBASIC4.2□□□□□ -1.74
CD40P25942 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.2□□□□□ -1.74
CD40P25942 AL732292.1-201ENST00000426692 226 ntBASIC4.2□□□□□ -1.74
CD40P25942 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.2□□□□□ -1.74
CD40P25942 AC007677.1-201ENST00000445757 515 ntBASIC4.2□□□□□ -1.74
CD40P25942 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.2□□□□□ -1.74
CD40P25942 RPS5P7-201ENST00000456664 608 ntBASIC4.2□□□□□ -1.74
CD40P25942 RN7SL517P-201ENST00000462240 305 ntBASIC4.2□□□□□ -1.74
CD40P25942 DYNLL1P5-201ENST00000467158 270 ntBASIC4.2□□□□□ -1.74
CD40P25942 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.2□□□□□ -1.74
CD40P25942 HIGD1AP13-201ENST00000509878 289 ntBASIC4.2□□□□□ -1.74
CD40P25942 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.2□□□□□ -1.74
CD40P25942 TBCAP3-201ENST00000512475 312 ntBASIC4.2□□□□□ -1.74
CD40P25942 Y_RNA.701-201ENST00000516812 110 ntBASIC4.2□□□□□ -1.74
CD40P25942 AC090136.1-201ENST00000520009 240 ntBASIC4.2□□□□□ -1.74
CD40P25942 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.2□□□□□ -1.74
CD40P25942 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.2□□□□□ -1.74
CD40P25942 BNIP3P1-201ENST00000547295 580 ntBASIC4.2□□□□□ -1.74
CD40P25942 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.2□□□□□ -1.74
CD40P25942 AL049839.1-201ENST00000556151 657 ntBASIC4.2□□□□□ -1.74
CD40P25942 AC022968.1-201ENST00000567372 442 ntBASIC4.2□□□□□ -1.74
CD40P25942 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.2□□□□□ -1.74
CD40P25942 FAM27B-201ENST00000610601 213 ntBASIC4.2□□□□□ -1.74
CD40P25942 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CD40P25942 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD40P25942 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CD40P25942 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CD40P25942 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CD40P25942 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.19□□□□□ -1.74
CD40P25942 SDAD1P2-201ENST00000441308 2028 ntBASIC4.19□□□□□ -1.74
CD40P25942 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.19□□□□□ -1.74
CD40P25942 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CD40P25942 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CD40P25942 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CD40P25942 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD40P25942 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CD40P25942 AC104623.2-202ENST00000623477 4002 ntBASIC4.19□□□□□ -1.74
CD40P25942 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD40P25942 DEFB108F-201ENST00000344638 222 ntBASIC4.19□□□□□ -1.74
CD40P25942 U3.30-201ENST00000391308 210 ntBASIC4.19□□□□□ -1.74
CD40P25942 EIF4E2P1-201ENST00000393781 255 ntBASIC4.19□□□□□ -1.74
CD40P25942 AL356057.2-201ENST00000403318 432 ntBASIC4.19□□□□□ -1.74
CD40P25942 RN7SKP16-201ENST00000410180 299 ntBASIC4.19□□□□□ -1.74
CD40P25942 RN7SKP216-201ENST00000411050 312 ntBASIC4.19□□□□□ -1.74
CD40P25942 AL513331.1-201ENST00000411908 397 ntBASIC4.19□□□□□ -1.74
CD40P25942 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.19□□□□□ -1.74
CD40P25942 RPL26P29-201ENST00000415623 438 ntBASIC4.19□□□□□ -1.74
CD40P25942 BX842559.1-201ENST00000419615 532 ntBASIC4.19□□□□□ -1.74
CD40P25942 AL160275.3-201ENST00000423876 471 ntBASIC4.19□□□□□ -1.74
CD40P25942 AL451139.1-201ENST00000434718 346 ntBASIC4.19□□□□□ -1.74
CD40P25942 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.19□□□□□ -1.74
CD40P25942 AC005019.1-201ENST00000436455 431 ntBASIC4.19□□□□□ -1.74
CD40P25942 NDUFA5P4-201ENST00000436704 385 ntBASIC4.19□□□□□ -1.74
CD40P25942 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.19□□□□□ -1.74
CD40P25942 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.19□□□□□ -1.74
CD40P25942 AC073264.2-201ENST00000448886 166 ntBASIC4.19□□□□□ -1.74
CD40P25942 NDUFS5P3-201ENST00000450668 321 ntBASIC4.19□□□□□ -1.74
CD40P25942 HMGB3P30-201ENST00000457863 606 ntBASIC4.19□□□□□ -1.74
CD40P25942 snoU13.4-201ENST00000458916 104 ntBASIC4.19□□□□□ -1.74
CD40P25942 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.19□□□□□ -1.74
CD40P25942 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms