| TFE3 | P19532 | NEFMP1-201 | ENST00000443423 | 1006 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC007557.1-201 | ENST00000451711 | 541 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL353152.1-201 | ENST00000455973 | 470 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | TH2LCRR-203 | ENST00000457489 | 439 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RPS3AP41-201 | ENST00000462701 | 778 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RPL21P103-201 | ENST00000479921 | 488 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC092666.1-202 | ENST00000493400 | 442 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RN7SL558P-201 | ENST00000497468 | 299 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC008526.1-201 | ENST00000509149 | 338 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC136777.1-201 | ENST00000517765 | 369 nt | TSL 4 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AF117829.1-210 | ENST00000523859 | 696 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AP006587.4-201 | ENST00000526053 | 529 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC104237.1-201 | ENST00000527443 | 539 nt | TSL 4 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC104002.2-201 | ENST00000553919 | 318 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | CYCSP40-201 | ENST00000575927 | 294 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC011487.3-201 | ENST00000593607 | 453 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | XIAPP1-201 | ENST00000603162 | 600 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC136443.5-201 | ENST00000603741 | 370 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL670379.10-201 | ENST00000604330 | 253 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | IGKV2OR2-2-201 | ENST00000605025 | 300 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ATP1B3P1-201 | ENST00000605365 | 821 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL670379.9-201 | ENST00000605428 | 253 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | DUSP12P1-201 | ENST00000612874 | 516 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL122125.1-201 | ENST00000616999 | 600 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | uc_338.22-201 | ENST00000622722 | 187 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ADCY10-201 | ENST00000367848 | 5055 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ZNF630-207 | ENST00000616492 | 2220 nt | APPRIS ALT2 TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ATP8B4-211 | ENST00000559829 | 4894 nt | APPRIS P1 TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | HSP90AA5P-201 | ENST00000438353 | 2192 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | FAM135A-210 | ENST00000505868 | 5173 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | OR6B1-202 | ENST00000641698 | 5153 nt | APPRIS P1 BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | VPS13D-213 | ENST00000613099 | 16245 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ZNF519P1-201 | ENST00000449011 | 1626 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| TFE3 | P19532 | GABRA2-211 | ENST00000514090 | 3401 nt | APPRIS P1 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL139811.1-201 | ENST00000424779 | 2299 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SOCS5P3-201 | ENST00000425115 | 1576 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SPEF2-216 | ENST00000637569 | 7350 nt | APPRIS ALT2 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | EIF2AK3-203 | ENST00000419748 | 4222 nt | TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | KIF3A-203 | ENST00000403231 | 2181 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | YWHAZ-201 | ENST00000353245 | 2829 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | MTND5P16-201 | ENST00000460269 | 1703 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC117470.1-201 | ENST00000381974 | 330 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | Y_RNA.459-201 | ENST00000384251 | 102 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL391417.1-201 | ENST00000404100 | 426 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RN7SKP125-201 | ENST00000410481 | 302 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL451107.1-201 | ENST00000416310 | 408 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | LINC01507-201 | ENST00000417801 | 446 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL669831.2-201 | ENST00000422528 | 456 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | PPP1R11P2-201 | ENST00000423543 | 382 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC068491.2-201 | ENST00000438897 | 617 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RPL32P28-201 | ENST00000443577 | 397 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AP000770.1-201 | ENST00000444123 | 583 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | Z73495.1-201 | ENST00000444982 | 147 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | KIAA0895-209 | ENST00000453212 | 956 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AURKAPS2-201 | ENST00000454983 | 333 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RPL30P15-201 | ENST00000457129 | 321 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | CXorf51A-201 | ENST00000458472 | 431 nt | APPRIS P1 TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | OARD1-209 | ENST00000471367 | 401 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AP001086.1-201 | ENST00000494882 | 321 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | BMPR1B-AS1-201 | ENST00000510795 | 511 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | LINC02103-201 | ENST00000512849 | 523 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SMURF2P1-201 | ENST00000514992 | 481 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SNORA14.1-201 | ENST00000516113 | 141 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RNU6-709P-201 | ENST00000517257 | 104 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RGS4-209 | ENST00000531057 | 544 nt | TSL 4 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC096558.2-201 | ENST00000546678 | 506 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | APAF1-207 | ENST00000547743 | 651 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | OR4H12P-201 | ENST00000556269 | 907 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL133371.2-201 | ENST00000556624 | 294 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | MTCO3P23-201 | ENST00000561363 | 289 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC107926.1-201 | ENST00000581673 | 621 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AP001972.3-202 | ENST00000603012 | 375 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC006363.1-201 | ENST00000603806 | 463 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC010378.1-201 | ENST00000619270 | 362 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL078596.1-201 | ENST00000624856 | 447 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | MTND5P42-201 | ENST00000637720 | 498 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SLC9C1-201 | ENST00000305815 | 4172 nt | APPRIS P3 TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | EYA1-205 | ENST00000388742 | 3907 nt | APPRIS P3 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SLC4A10-203 | ENST00000415876 | 5578 nt | TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | CMYA5-201 | ENST00000446378 | 12847 nt | APPRIS P1 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | R3HDM1-201 | ENST00000264160 | 4648 nt | APPRIS P3 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | DICER1-212 | ENST00000541352 | 5621 nt | TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | CFAP47-203 | ENST00000378653 | 9943 nt | APPRIS P2 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ASB14-202 | ENST00000487349 | 3179 nt | APPRIS P2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ADAM18-201 | ENST00000265707 | 2388 nt | APPRIS P3 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SMAD5-212 | ENST00000545620 | 6937 nt | APPRIS P1 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC007823.1-201 | ENST00000569932 | 1566 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC093535.2-201 | ENST00000624769 | 2326 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | CD36-221 | ENST00000534394 | 1741 nt | TSL 2 BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SCN3A-203 | ENST00000409101 | 6599 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | CUL2-201 | ENST00000374746 | 3903 nt | TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AL592437.2-201 | ENST00000421655 | 2434 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | OR2L3-201 | ENST00000359959 | 2792 nt | APPRIS P1 BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | ZBTB8OSP1-201 | ENST00000342688 | 498 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | Y_RNA.28-201 | ENST00000362554 | 111 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | RNU6-562P-201 | ENST00000362731 | 107 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | Y_RNA.144-201 | ENST00000363521 | 113 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | SNORA16.2-201 | ENST00000390991 | 127 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC003092.1-201 | ENST00000415536 | 639 nt | TSL 3 BASIC | 5.03 | □□□□□ -1.6 | | |
| TFE3 | P19532 | AC093911.1-201 | ENST00000419129 | 552 nt | TSL 4 BASIC | 5.03 | □□□□□ -1.6 | | |