Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SDCBPP1-201ENST00000440192 890 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 NANOGNBP1-201ENST00000448444 480 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AC093392.2-201ENST00000450682 337 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AL353691.1-201ENST00000451332 387 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.98□□□□□ -1.93
XRCC1P18887 RPL21P134-201ENST00000453468 483 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.98□□□□□ -1.93
XRCC1P18887 FAM172BP-201ENST00000487497 1089 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AC023424.2-201ENST00000493479 777 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.98□□□□□ -1.93
XRCC1P18887 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.98□□□□□ -1.93
XRCC1P18887 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.98□□□□□ -1.93
XRCC1P18887 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
XRCC1P18887 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.98□□□□□ -1.93
XRCC1P18887 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.98□□□□□ -1.93
XRCC1P18887 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.98□□□□□ -1.93
XRCC1P18887 MTCO2P2-201ENST00000591258 225 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AC011458.1-201ENST00000604034 617 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AP001330.4-201ENST00000604350 154 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AL110115.1-201ENST00000614396 364 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 AC095031.1-201ENST00000623685 672 ntBASIC2.98□□□□□ -1.93
XRCC1P18887 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.98□□□□□ -1.93
XRCC1P18887 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
XRCC1P18887 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
XRCC1P18887 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
XRCC1P18887 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.97□□□□□ -1.93
XRCC1P18887 RNU6-28P-201ENST00000362378 107 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 Y_RNA.192-201ENST00000363977 102 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 RNU6-906P-201ENST00000384700 70 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AL136372.1-201ENST00000403060 228 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.97□□□□□ -1.93
XRCC1P18887 RNU2-47P-201ENST00000410649 186 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 RPS15AP38-201ENST00000413110 372 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.97□□□□□ -1.93
XRCC1P18887 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
XRCC1P18887 OR2A20P-203ENST00000498397 1268 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.97□□□□□ -1.93
XRCC1P18887 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.97□□□□□ -1.93
XRCC1P18887 AC116353.3-201ENST00000511215 249 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.97□□□□□ -1.93
XRCC1P18887 RNA5SP76-201ENST00000516277 87 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AC009812.2-201ENST00000517657 457 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 OR5AK1P-201ENST00000524837 922 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
XRCC1P18887 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.97□□□□□ -1.93
XRCC1P18887 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
XRCC1P18887 AC022080.3-201ENST00000544433 482 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
XRCC1P18887 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.97□□□□□ -1.93
XRCC1P18887 AC083760.1-201ENST00000589621 670 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AC245884.10-201ENST00000597355 337 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 BDH2P1-201ENST00000602288 736 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 MTND3P19-201ENST00000603825 345 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 DUXAP11-201ENST00000603858 526 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AC004853.1-201ENST00000604902 698 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.97□□□□□ -1.93
XRCC1P18887 AC106028.5-201ENST00000610332 395 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 TUG1_1.1-201ENST00000610654 145 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 AL390240.1-201ENST00000612950 384 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
XRCC1P18887 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
XRCC1P18887 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.97□□□□□ -1.93
XRCC1P18887 AC093010.3-201ENST00000570269 15214 ntBASIC2.97□□□□□ -1.93
XRCC1P18887 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
XRCC1P18887 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
XRCC1P18887 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
XRCC1P18887 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
XRCC1P18887 AC000403.1-201ENST00000613696 3585 ntBASIC2.96□□□□□ -1.93
XRCC1P18887 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
XRCC1P18887 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.96□□□□□ -1.94
XRCC1P18887 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
XRCC1P18887 ZNF29P-201ENST00000225587 168 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
XRCC1P18887 SNORA44-201ENST00000384584 132 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 RPL5P18-201ENST00000406671 891 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 AL591034.1-201ENST00000407447 340 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.96□□□□□ -1.94
XRCC1P18887 AC079780.1-201ENST00000428259 207 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.96□□□□□ -1.94
XRCC1P18887 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.96□□□□□ -1.94
XRCC1P18887 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 HMGN2P13-201ENST00000476476 274 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 RPS3AP14-201ENST00000483907 780 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
XRCC1P18887 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.96□□□□□ -1.94
XRCC1P18887 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 RN7SKP272-201ENST00000516988 232 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 SNORA31.26-201ENST00000517250 137 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 AC103783.1-201ENST00000520506 373 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 DEFB131D-201ENST00000526803 184 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.96□□□□□ -1.94
XRCC1P18887 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
XRCC1P18887 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 NBEAP1-201ENST00000554452 979 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms