Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.69□□□□□ -1.82
PCNAP12004 AC005332.10-201ENST00000612725 619 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AL353748.2-201ENST00000622148 471 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AL159972.1-201ENST00000625150 448 ntBASIC3.69□□□□□ -1.82
PCNAP12004 AC010149.2-201ENST00000637608 315 ntBASIC3.69□□□□□ -1.82
PCNAP12004 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PCNAP12004 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCNAP12004 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.68□□□□□ -1.82
PCNAP12004 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCNAP12004 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCNAP12004 RNU6-1078P-201ENST00000364522 103 ntBASIC3.68□□□□□ -1.82
PCNAP12004 Y_RNA.517-201ENST00000384551 106 ntBASIC3.68□□□□□ -1.82
PCNAP12004 HMGB3P23-201ENST00000414981 585 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AL137014.1-201ENST00000420490 1226 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.68□□□□□ -1.82
PCNAP12004 AL353777.1-201ENST00000425552 326 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.68□□□□□ -1.82
PCNAP12004 AC104651.1-201ENST00000427559 735 ntBASIC3.68□□□□□ -1.82
PCNAP12004 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.68□□□□□ -1.82
PCNAP12004 Z74696.2-201ENST00000436514 498 ntBASIC3.68□□□□□ -1.82
PCNAP12004 HMGN2P20-201ENST00000437531 273 ntBASIC3.68□□□□□ -1.82
PCNAP12004 RPL21P89-201ENST00000444021 467 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AL359073.1-201ENST00000448036 403 ntBASIC3.68□□□□□ -1.82
PCNAP12004 SNRPFP4-201ENST00000456366 242 ntBASIC3.68□□□□□ -1.82
PCNAP12004 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.68□□□□□ -1.82
PCNAP12004 snoU109.1-201ENST00000459339 135 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC010285.1-201ENST00000470580 392 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC011825.1-201ENST00000484967 388 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.68□□□□□ -1.82
PCNAP12004 RNA5SP208-201ENST00000516156 78 ntBASIC3.68□□□□□ -1.82
PCNAP12004 RNU6-405P-201ENST00000516637 110 ntBASIC3.68□□□□□ -1.82
PCNAP12004 SNORA18.6-201ENST00000516792 115 ntBASIC3.68□□□□□ -1.82
PCNAP12004 RNU2-46P-201ENST00000517038 113 ntBASIC3.68□□□□□ -1.82
PCNAP12004 MTCYBP41-201ENST00000528913 1123 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.68□□□□□ -1.82
PCNAP12004 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.68□□□□□ -1.82
PCNAP12004 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.68□□□□□ -1.82
PCNAP12004 OR4T1P-201ENST00000554933 911 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AL845331.3-202ENST00000562856 261 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.68□□□□□ -1.82
PCNAP12004 AP001429.1-201ENST00000602568 530 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC079089.3-201ENST00000603094 673 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AC008121.2-201ENST00000614647 523 ntBASIC3.68□□□□□ -1.82
PCNAP12004 MIR6875-201ENST00000617506 72 ntBASIC3.68□□□□□ -1.82
PCNAP12004 AL590240.3-201ENST00000621416 943 ntBASIC3.68□□□□□ -1.82
PCNAP12004 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
PCNAP12004 AC110994.2-201ENST00000635481 492 ntBASIC3.68□□□□□ -1.82
PCNAP12004 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.68□□□□□ -1.82
PCNAP12004 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCNAP12004 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCNAP12004 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
PCNAP12004 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
PCNAP12004 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.68□□□□□ -1.82
PCNAP12004 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.67□□□□□ -1.82
PCNAP12004 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PCNAP12004 AC110774.1-201ENST00000623567 2018 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.67□□□□□ -1.82
PCNAP12004 RNA5SP443-201ENST00000363083 132 ntBASIC3.67□□□□□ -1.82
PCNAP12004 U8.3-201ENST00000363321 132 ntBASIC3.67□□□□□ -1.82
PCNAP12004 RNY4P16-201ENST00000364768 94 ntBASIC3.67□□□□□ -1.82
PCNAP12004 MIR19A-201ENST00000384878 82 ntBASIC3.67□□□□□ -1.82
PCNAP12004 MIR199A2-201ENST00000385289 110 ntBASIC3.67□□□□□ -1.82
PCNAP12004 RNU2-66P-201ENST00000410650 161 ntBASIC3.67□□□□□ -1.82
PCNAP12004 RAD23BP2-201ENST00000416003 1207 ntBASIC3.67□□□□□ -1.82
PCNAP12004 MTCO1P21-201ENST00000416634 589 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.67□□□□□ -1.82
PCNAP12004 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.67□□□□□ -1.82
PCNAP12004 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.67□□□□□ -1.82
PCNAP12004 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.67□□□□□ -1.82
PCNAP12004 GAPDHP17-201ENST00000449858 1001 ntBASIC3.67□□□□□ -1.82
PCNAP12004 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.67□□□□□ -1.82
PCNAP12004 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.67□□□□□ -1.82
PCNAP12004 RPS3AP50-201ENST00000487064 803 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.67□□□□□ -1.82
PCNAP12004 AC010460.1-201ENST00000507087 466 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AC010265.1-201ENST00000513509 211 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AC107934.1-201ENST00000522215 217 ntBASIC3.67□□□□□ -1.82
PCNAP12004 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.67□□□□□ -1.82
PCNAP12004 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.67□□□□□ -1.82
PCNAP12004 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 MIR3118-1-201ENST00000581787 76 ntBASIC3.67□□□□□ -1.82
PCNAP12004 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.67□□□□□ -1.82
PCNAP12004 CKS1BP3-201ENST00000600888 237 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AC119501.1-201ENST00000603646 475 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AC091805.2-201ENST00000603848 235 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AC090578.1-201ENST00000604955 591 ntBASIC3.67□□□□□ -1.82
PCNAP12004 SNORA51-201ENST00000606420 132 ntBASIC3.67□□□□□ -1.82
PCNAP12004 BX664608.1-201ENST00000610519 487 ntBASIC3.67□□□□□ -1.82
PCNAP12004 TUG1_1.1-201ENST00000610654 145 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AP001506.1-201ENST00000615444 211 ntBASIC3.67□□□□□ -1.82
PCNAP12004 AC108479.2-201ENST00000617314 601 ntBASIC3.67□□□□□ -1.82
PCNAP12004 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCNAP12004 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCNAP12004 AC091953.2-201ENST00000623979 160 ntBASIC3.67□□□□□ -1.82
PCNAP12004 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.67□□□□□ -1.82
PCNAP12004 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms