Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNA5SP320-201ENST00000516263 124 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.73□□□□□ -2.13
CXCL1P09341 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL1P09341 AC113192.3-201ENST00000529152 742 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AC084033.1-201ENST00000550830 633 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.73□□□□□ -2.13
CXCL1P09341 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.73□□□□□ -2.13
CXCL1P09341 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CXCL1P09341 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.73□□□□□ -2.13
CXCL1P09341 MIR5007-201ENST00000583098 95 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AC022387.2-201ENST00000604050 448 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AC103810.6-201ENST00000606708 136 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CXCL1P09341 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 AC098657.3-201ENST00000620434 263 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CXCL1P09341 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.73□□□□□ -2.13
CXCL1P09341 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CXCL1P09341 AC097714.1-201ENST00000511272 1647 ntBASIC1.73□□□□□ -2.13
CXCL1P09341 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CXCL1P09341 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CXCL1P09341 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CXCL1P09341 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
CXCL1P09341 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
CXCL1P09341 RNA5SP68-201ENST00000363885 119 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 RNU6-270P-201ENST00000364131 105 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL1P09341 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AC019097.1-201ENST00000424783 735 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 MTCO1P57-201ENST00000432182 261 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 FCF1P1-201ENST00000432690 571 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 MTCYBP3-201ENST00000445588 1137 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 RPS15AP27-201ENST00000449183 343 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 AL139109.1-201ENST00000455491 297 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 RNU6-420P-201ENST00000458780 107 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 RNU7-26P-201ENST00000458980 63 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 snoU13.28-201ENST00000459235 104 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 AC107626.1-201ENST00000471084 183 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL1P09341 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 CAB39P1-201ENST00000502277 460 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL1P09341 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 NDUFS5P6-201ENST00000529136 295 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL1P09341 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL1P09341 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.72□□□□□ -2.13
CXCL1P09341 AC023824.2-201ENST00000566185 400 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 MIR3921-201ENST00000577308 85 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AC011471.1-201ENST00000585766 187 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.72□□□□□ -2.13
CXCL1P09341 AL022578.1-201ENST00000439330 1433 ntBASIC1.72□□□□□ -2.13
CXCL1P09341 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CXCL1P09341 NUP58P1-201ENST00000502546 1738 ntBASIC1.71□□□□□ -2.13
CXCL1P09341 AC009487.4-201ENST00000624969 3585 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CXCL1P09341 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.71□□□□□ -2.14
CXCL1P09341 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CXCL1P09341 ANKRD36P1-201ENST00000344424 659 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 RN7SKP226-201ENST00000364912 300 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 MIR518C-201ENST00000384822 101 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 MIR767-201ENST00000390228 109 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC009237.2-201ENST00000421358 284 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL1P09341 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.71□□□□□ -2.14
CXCL1P09341 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL1P09341 AL121578.1-201ENST00000428051 892 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 MTATP6P11-201ENST00000428071 670 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.71□□□□□ -2.14
CXCL1P09341 AC092573.2-201ENST00000434546 243 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 RPS15AP28-201ENST00000435088 386 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.71□□□□□ -2.14
CXCL1P09341 SDR42E1P3-201ENST00000438345 502 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.71□□□□□ -2.14
CXCL1P09341 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL1P09341 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 DNAJC19P8-201ENST00000452887 259 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 SNORD109B-201ENST00000458961 67 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 SNORD109A-201ENST00000459128 67 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC011825.1-201ENST00000484967 388 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC109486.1-201ENST00000486833 374 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 RPS27P21-201ENST00000486977 252 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 KLRA1P-201ENST00000503499 986 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 MTCYBP17-201ENST00000503579 789 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.71□□□□□ -2.14
CXCL1P09341 MTCO3P42-201ENST00000509488 518 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.71□□□□□ -2.14
CXCL1P09341 MTCO3P39-201ENST00000514812 518 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 LSM6P2-201ENST00000552208 177 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.71□□□□□ -2.14
CXCL1P09341 AL138976.2-201ENST00000563989 694 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms