Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC073901.1-201ENST00000462471 408 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A2P08572 SCARNA17.1-201ENST00000516211 143 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 SCARNA17.2-201ENST00000516334 143 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.03□□□□□ -2.08
COL4A2P08572 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL4A2P08572 ISCA1P3-201ENST00000577104 373 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 MIR4504-201ENST00000577413 92 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 LRRC37A5P-203ENST00000580181 585 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.03□□□□□ -2.08
COL4A2P08572 YWHAQP7-201ENST00000603536 658 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC011468.4-201ENST00000603942 409 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC096586.1-201ENST00000610267 561 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A2P08572 SCARNA17.4-201ENST00000614296 143 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC018926.3-201ENST00000618841 406 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AL512643.1-201ENST00000635735 524 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC068620.4-201ENST00000636730 1182 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A2P08572 ZNF720P1-201ENST00000562403 1939 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 MTND4P8-201ENST00000514997 1362 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 AC012321.1-201ENST00000561622 1588 ntBASIC2.03□□□□□ -2.08
COL4A2P08572 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL4A2P08572 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A2P08572 RNU6-1243P-201ENST00000364028 107 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 RNU6-1293P-201ENST00000384077 107 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
COL4A2P08572 AC073264.1-201ENST00000411508 416 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 RPL31P2-201ENST00000413849 377 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.03□□□□□ -2.09
COL4A2P08572 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.03□□□□□ -2.09
COL4A2P08572 MTND1P33-201ENST00000446251 917 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
COL4A2P08572 OR52A4P-202ENST00000481634 799 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AC078918.1-201ENST00000498515 228 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 GZMAP1-201ENST00000503054 631 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 RNU6-488P-201ENST00000515918 99 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.03□□□□□ -2.09
COL4A2P08572 FAM92A1P1-201ENST00000528023 890 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AP000889.2-201ENST00000532684 490 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.03□□□□□ -2.09
COL4A2P08572 AC090695.1-201ENST00000561269 1222 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.03□□□□□ -2.09
COL4A2P08572 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.03□□□□□ -2.09
COL4A2P08572 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.03□□□□□ -2.09
COL4A2P08572 AC008687.2-201ENST00000597865 520 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 SNRPGP15-201ENST00000600149 222 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.03□□□□□ -2.09
COL4A2P08572 AL021368.1-201ENST00000607490 540 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 U73479.1-201ENST00000618062 168 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 RNU6-156P-201ENST00000621869 107 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AC091953.2-201ENST00000623979 160 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AC106730.3-201ENST00000624568 641 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 AC048347.1-201ENST00000624621 427 ntBASIC2.03□□□□□ -2.09
COL4A2P08572 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
COL4A2P08572 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A2P08572 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A2P08572 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A2P08572 MFSD8-213ENST00000641134 1327 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A2P08572 FAM35CP-201ENST00000554755 2470 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A2P08572 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A2P08572 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A2P08572 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 NEK4P1-201ENST00000433383 879 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 HMGB1P45-201ENST00000435986 653 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC002542.1-201ENST00000440683 193 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A2P08572 FABP5P13-201ENST00000452144 328 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC233279.1-201ENST00000455300 423 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC108729.2-201ENST00000476543 840 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC104435.1-201ENST00000483483 166 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 RPL21P47-201ENST00000483696 477 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 RNF138P1-201ENST00000502765 546 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A2P08572 AC104057.1-201ENST00000515547 497 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 RNU6-1102P-201ENST00000516149 96 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 SNORA31.26-201ENST00000517250 137 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A2P08572 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL4A2P08572 AC011611.5-201ENST00000552477 578 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A2P08572 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A2P08572 AC012254.4-201ENST00000588843 273 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A2P08572 AL355812.1-201ENST00000603215 216 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 FRG1HP-204ENST00000617940 757 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A2P08572 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A2P08572 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A2P08572 AC025263.3-201ENST00000622965 1396 ntBASIC2.02□□□□□ -2.09
COL4A2P08572 AC016716.1-201ENST00000265882 708 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 RNU6-1140P-201ENST00000410517 106 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A2P08572 USP9YP27-201ENST00000418455 438 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 PNRC2P1-201ENST00000423940 420 ntBASIC2.01□□□□□ -2.09
COL4A2P08572 FAM204CP-201ENST00000424489 642 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms