Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.71□□□□□ -1.82
RB1P06400 RPL23AP94-201ENST00000512518 302 ntBASIC3.71□□□□□ -1.82
RB1P06400 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RB1P06400 RNU6-759P-201ENST00000516740 103 ntBASIC3.71□□□□□ -1.82
RB1P06400 AC103783.1-201ENST00000520506 373 ntBASIC3.71□□□□□ -1.82
RB1P06400 HIGD1AP10-201ENST00000527837 282 ntBASIC3.71□□□□□ -1.82
RB1P06400 EIF4BP1-201ENST00000554881 351 ntBASIC3.71□□□□□ -1.82
RB1P06400 AC027807.1-201ENST00000559921 996 ntBASIC3.71□□□□□ -1.82
RB1P06400 AC090888.1-201ENST00000561335 1141 ntBASIC3.71□□□□□ -1.82
RB1P06400 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.71□□□□□ -1.82
RB1P06400 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.71□□□□□ -1.82
RB1P06400 FAM60BP-201ENST00000578364 658 ntBASIC3.71□□□□□ -1.82
RB1P06400 LARP7P3-201ENST00000579888 337 ntBASIC3.71□□□□□ -1.82
RB1P06400 MIR544B-201ENST00000582372 78 ntBASIC3.71□□□□□ -1.82
RB1P06400 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.71□□□□□ -1.82
RB1P06400 AC011468.4-201ENST00000603942 409 ntBASIC3.71□□□□□ -1.82
RB1P06400 AL022099.1-201ENST00000604551 712 ntBASIC3.71□□□□□ -1.82
RB1P06400 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.71□□□□□ -1.82
RB1P06400 AC107214.2-201ENST00000608204 634 ntBASIC3.71□□□□□ -1.82
RB1P06400 AC103710.4-201ENST00000609301 899 ntBASIC3.71□□□□□ -1.82
RB1P06400 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RB1P06400 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RB1P06400 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RB1P06400 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RB1P06400 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RB1P06400 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RB1P06400 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RB1P06400 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RB1P06400 U3.39-201ENST00000408569 239 ntBASIC3.7□□□□□ -1.82
RB1P06400 RNU2-43P-201ENST00000410306 190 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.7□□□□□ -1.82
RB1P06400 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.7□□□□□ -1.82
RB1P06400 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RB1P06400 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.7□□□□□ -1.82
RB1P06400 AL445669.1-201ENST00000426743 755 ntBASIC3.7□□□□□ -1.82
RB1P06400 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.7□□□□□ -1.82
RB1P06400 AL662791.1-201ENST00000441992 928 ntBASIC3.7□□□□□ -1.82
RB1P06400 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.7□□□□□ -1.82
RB1P06400 DNAJC19P1-201ENST00000455312 319 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.7□□□□□ -1.82
RB1P06400 OR6K1P-201ENST00000456766 971 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC011825.1-201ENST00000484967 388 ntBASIC3.7□□□□□ -1.82
RB1P06400 OR2A20P-203ENST00000498397 1268 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC021678.1-201ENST00000505195 936 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC112198.1-201ENST00000505369 1220 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC004069.2-201ENST00000505438 1114 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC111000.2-201ENST00000507775 550 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.7□□□□□ -1.82
RB1P06400 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.7□□□□□ -1.82
RB1P06400 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.7□□□□□ -1.82
RB1P06400 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.7□□□□□ -1.82
RB1P06400 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.7□□□□□ -1.82
RB1P06400 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.7□□□□□ -1.82
RB1P06400 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.7□□□□□ -1.82
RB1P06400 AC034268.2-201ENST00000571784 482 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC006504.3-201ENST00000586818 523 ntBASIC3.7□□□□□ -1.82
RB1P06400 CLIC4P2-201ENST00000601934 717 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC112187.2-201ENST00000604345 283 ntBASIC3.7□□□□□ -1.82
RB1P06400 BCRP9-201ENST00000605312 388 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC122133.1-201ENST00000613964 233 ntBASIC3.7□□□□□ -1.82
RB1P06400 AL162274.2-201ENST00000614406 332 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC092192.1-201ENST00000633154 1018 ntBASIC3.7□□□□□ -1.82
RB1P06400 AC244205.2-202ENST00000635781 342 ntBASIC3.7□□□□□ -1.82
RB1P06400 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RB1P06400 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RB1P06400 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RB1P06400 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.7□□□□□ -1.82
RB1P06400 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RB1P06400 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.69□□□□□ -1.82
RB1P06400 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.69□□□□□ -1.82
RB1P06400 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.69□□□□□ -1.82
RB1P06400 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RB1P06400 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RB1P06400 RNU6-769P-201ENST00000384407 104 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.69□□□□□ -1.82
RB1P06400 NDUFB1P1-201ENST00000435191 180 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC004866.2-201ENST00000438285 481 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC112653.1-201ENST00000443851 386 ntBASIC3.69□□□□□ -1.82
RB1P06400 RAC1P7-201ENST00000445367 377 ntBASIC3.69□□□□□ -1.82
RB1P06400 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC234775.1-201ENST00000454247 670 ntBASIC3.69□□□□□ -1.82
RB1P06400 MTCO3P20-201ENST00000454926 688 ntBASIC3.69□□□□□ -1.82
RB1P06400 RPL23AP31-201ENST00000456160 467 ntBASIC3.69□□□□□ -1.82
RB1P06400 RN7SL93P-201ENST00000463035 293 ntBASIC3.69□□□□□ -1.82
RB1P06400 RN7SL330P-201ENST00000469709 307 ntBASIC3.69□□□□□ -1.82
RB1P06400 RN7SL594P-201ENST00000470590 287 ntBASIC3.69□□□□□ -1.82
RB1P06400 UBE2DNL-203ENST00000474922 222 ntBASIC3.69□□□□□ -1.82
RB1P06400 RPS3AP43-201ENST00000479743 781 ntBASIC3.69□□□□□ -1.82
RB1P06400 RPF2P2-201ENST00000504693 896 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.69□□□□□ -1.82
RB1P06400 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.69□□□□□ -1.82
RB1P06400 MTND2P38-201ENST00000522536 667 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.69□□□□□ -1.82
RB1P06400 AC007834.2-201ENST00000536310 343 ntBASIC3.69□□□□□ -1.82
RB1P06400 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.69□□□□□ -1.82
RB1P06400 AC012435.1-202ENST00000568772 240 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC135628.1-201ENST00000568867 534 ntBASIC3.69□□□□□ -1.82
RB1P06400 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.69□□□□□ -1.82
RB1P06400 MIR4276-201ENST00000584832 70 ntBASIC3.69□□□□□ -1.82
RB1P06400 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms