Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.46□□□□□ -1.69
HLA-DOAP06340 AC130650.2-201ENST00000618736 2403 ntBASIC4.46□□□□□ -1.69
HLA-DOAP06340 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DOAP06340 AL049780.3-201ENST00000624612 1583 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOAP06340 MTND4P23-201ENST00000447723 1363 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 Y_RNA.86-201ENST00000363020 111 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 RNU6-853P-201ENST00000364306 107 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 Y_RNA.356-201ENST00000365475 113 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 Y_RNA.535-201ENST00000384612 99 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 RNU6-908P-201ENST00000410160 94 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 RPS29P4-201ENST00000414733 161 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC009302.1-201ENST00000417147 390 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC007283.2-201ENST00000424739 197 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC019097.1-201ENST00000424783 735 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AL035410.1-201ENST00000427409 427 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AL118496.2-201ENST00000448300 230 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 RPS3AP46-201ENST00000448352 682 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AL451050.1-201ENST00000450126 415 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC110792.2-201ENST00000510278 224 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 RAC1P2-201ENST00000511164 579 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC026726.1-201ENST00000512859 601 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 LRRC34P2-201ENST00000514850 553 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 CENPUP1-201ENST00000526649 1202 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 SUB1P2-201ENST00000556401 297 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AL138976.2-201ENST00000563989 694 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 SNORA62.6-201ENST00000606322 83 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 RNU6-87P-201ENST00000607561 108 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC019176.2-201ENST00000611579 315 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 RMST_3.1-201ENST00000611651 109 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC024614.3-201ENST00000637860 256 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 AC010329.2-201ENST00000595195 2737 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOAP06340 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOAP06340 UBE3AP2-201ENST00000429033 2259 ntBASIC4.46□□□□□ -1.7
HLA-DOAP06340 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOAP06340 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOAP06340 MTND5P28-201ENST00000438005 1594 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 OR52B1P-201ENST00000316506 909 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 SNORA63.1-201ENST00000362493 131 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 SNORD56.2-201ENST00000363242 71 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 SNORD46.1-201ENST00000364139 104 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 Y_RNA.529-201ENST00000384586 119 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 RPL31P1-201ENST00000398116 372 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 CRYBB2P1-203ENST00000415709 538 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 HMGN2P31-201ENST00000432430 273 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 HSPD1P21-201ENST00000436541 245 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 RPS15AP9-201ENST00000439856 381 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 HSPE1P28-201ENST00000443139 211 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 FDX1P2-201ENST00000450769 375 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 snoU13.22-201ENST00000459428 104 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 RNU6-714P-201ENST00000516963 103 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 HSPA8P13-201ENST00000523715 472 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 DEFB109D-201ENST00000529497 240 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC034105.3-201ENST00000565294 442 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 MIR3167-201ENST00000579623 85 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC244505.7-201ENST00000599675 272 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 AL009028.1-201ENST00000604895 802 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC113194.1-201ENST00000606037 500 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 RNU1-30P-201ENST00000606575 163 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC069200.1-201ENST00000609511 323 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC084757.4-201ENST00000616350 526 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC012314.7-201ENST00000619693 93 ntBASIC4.45□□□□□ -1.7
HLA-DOAP06340 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOAP06340 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOAP06340 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DOAP06340 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOAP06340 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 NMD3P1-201ENST00000439704 1488 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms