| MT1A | P04731 | WWP1P1-201 | ENST00000466609 | 2769 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNU6-799P-201 | ENST00000363567 | 107 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNA5SP27-201 | ENST00000363839 | 119 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | SNORA51.2-201 | ENST00000364595 | 132 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | C1orf185-201 | ENST00000371759 | 915 nt | APPRIS P2 TSL 2 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNU6-1072P-201 | ENST00000384703 | 107 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNU6-443P-201 | ENST00000384780 | 107 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | MIR17-201 | ENST00000385012 | 84 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | MCTS2P-201 | ENST00000394552 | 546 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL121972.1-201 | ENST00000402023 | 252 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNU2-17P-201 | ENST00000410290 | 190 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RPL31P63-201 | ENST00000422565 | 375 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | BX510359.4-201 | ENST00000423750 | 193 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | OR4K11P-201 | ENST00000431829 | 904 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL356277.3-201 | ENST00000432484 | 618 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL591806.2-201 | ENST00000433122 | 173 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL606534.3-201 | ENST00000437499 | 373 nt | TSL 5 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL050338.1-201 | ENST00000445585 | 786 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL627224.1-201 | ENST00000448334 | 444 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC009158.1-205 | ENST00000452511 | 895 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC008154.1-201 | ENST00000453087 | 327 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | HMGN2P23-201 | ENST00000456759 | 269 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL024497.2-201 | ENST00000457081 | 317 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | PPP1R2P5-201 | ENST00000457256 | 603 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC108752.1-201 | ENST00000484679 | 576 nt | TSL 5 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | ANKRD36B-207 | ENST00000497329 | 649 nt | TSL 1 (best) BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC108210.2-201 | ENST00000503681 | 201 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | BMPR1B-AS1-201 | ENST00000510795 | 511 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | CFAP100-207 | ENST00000510833 | 481 nt | APPRIS ALT2 TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RAC1P5-201 | ENST00000512182 | 576 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC110009.1-201 | ENST00000512965 | 451 nt | TSL 5 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RN7SKP31-201 | ENST00000516354 | 278 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNU6-347P-201 | ENST00000516658 | 105 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC018682.2-201 | ENST00000517716 | 399 nt | TSL 5 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC090541.1-201 | ENST00000519803 | 467 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC023632.5-201 | ENST00000521010 | 491 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | CCDC179-202 | ENST00000532798 | 791 nt | APPRIS P1 TSL 2 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | OSBPL9P3-201 | ENST00000534523 | 595 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | SETP7-201 | ENST00000552169 | 453 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC027458.1-201 | ENST00000563639 | 613 nt | TSL 1 (best) BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | LIVAR-201 | ENST00000578633 | 384 nt | TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC090897.2-201 | ENST00000581715 | 130 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | ZNF616-202 | ENST00000596290 | 568 nt | TSL 4 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AP000873.2-201 | ENST00000602381 | 406 nt | TSL 2 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC013444.2-201 | ENST00000603317 | 787 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC008962.1-201 | ENST00000605729 | 304 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC008083.4-201 | ENST00000615076 | 444 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | MIR6715A-201 | ENST00000615929 | 79 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC108479.2-201 | ENST00000617314 | 601 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | WFDC11-203 | ENST00000618797 | 561 nt | APPRIS P1 TSL 5 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AP003122.6-201 | ENST00000623831 | 495 nt | BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | PIK3C2G-203 | ENST00000535651 | 2497 nt | TSL 5 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | OR5K1-202 | ENST00000642057 | 3466 nt | APPRIS P1 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | SHOC2-201 | ENST00000265277 | 3691 nt | TSL 2 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | AGTR1-206 | ENST00000474935 | 1795 nt | APPRIS P1 TSL 3 BASIC | 0.5 | □□□□□ -2.33 | | |
| MT1A | P04731 | CEP290-201 | ENST00000309041 | 7616 nt | APPRIS ALT1 TSL 5 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | ZNF260-203 | ENST00000588993 | 4174 nt | APPRIS P1 TSL 1 (best) BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | ZNF260-205 | ENST00000593142 | 4047 nt | APPRIS P1 TSL 1 (best) BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | CNBD1-202 | ENST00000518476 | 1594 nt | APPRIS P2 TSL 1 (best) BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL354685.2-201 | ENST00000448218 | 1447 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | SNORA16B-201 | ENST00000364674 | 135 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNA5SP190-201 | ENST00000365222 | 118 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | MIR153-1-201 | ENST00000384914 | 90 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | SNORA67.5-201 | ENST00000391036 | 107 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | 5S_rRNA.2-201 | ENST00000391293 | 112 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNU2-71P-201 | ENST00000411395 | 189 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL078590.1-201 | ENST00000412602 | 479 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC104777.3-201 | ENST00000416350 | 545 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC133106.1-201 | ENST00000419029 | 397 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL136322.1-201 | ENST00000422250 | 548 nt | TSL 4 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | RPL7P37-201 | ENST00000425095 | 738 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | RPL35AP22-201 | ENST00000436855 | 335 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | BNIP3P2-201 | ENST00000441221 | 577 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | LINC01510-201 | ENST00000441991 | 468 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC003001.1-201 | ENST00000443247 | 1135 nt | TSL 5 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | LINC02195-201 | ENST00000443373 | 294 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | LINC00529-201 | ENST00000443854 | 241 nt | TSL 2 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | MRPL35P4-201 | ENST00000453682 | 566 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | NF1P3-201 | ENST00000457709 | 450 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | CHRM3-AS2-203 | ENST00000458325 | 895 nt | TSL 2 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | RNU1-98P-201 | ENST00000458992 | 160 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | SNORD13-201 | ENST00000459299 | 104 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | BZW1P2-201 | ENST00000473537 | 826 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC069528.1-202 | ENST00000482888 | 637 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | C4orf33-204 | ENST00000502887 | 1126 nt | TSL 1 (best) BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC096745.1-201 | ENST00000509945 | 370 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | LINC01216-201 | ENST00000515728 | 824 nt | TSL 5 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC099520.1-208 | ENST00000518276 | 472 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | IGLVVI-22-1-201 | ENST00000521183 | 211 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC091819.2-201 | ENST00000522292 | 490 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AP005597.4-201 | ENST00000526762 | 229 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC084851.1-201 | ENST00000529105 | 249 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | PTP4A1P6-201 | ENST00000531034 | 478 nt | BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC023796.1-201 | ENST00000536131 | 670 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC092490.2-202 | ENST00000544922 | 462 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC079907.1-201 | ENST00000552707 | 374 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AL355076.2-202 | ENST00000553754 | 574 nt | TSL 4 BASIC | 0.49 | □□□□□ -2.33 | | |
| MT1A | P04731 | AC090971.2-201 | ENST00000558142 | 510 nt | TSL 3 BASIC | 0.49 | □□□□□ -2.33 | | |