Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC114322.1-201ENST00000506771 926 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 RNU6-583P-201ENST00000516012 92 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 SCARNA13-201ENST00000516672 275 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 CR383656.7-201ENST00000548164 174 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 SNORD84-203ENST00000584275 78 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 ZNF861P-201ENST00000588126 639 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AL160237.3-201ENST00000604114 1013 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC097504.2-201ENST00000608088 454 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC131902.3-201ENST00000611767 581 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC010608.3-201ENST00000625048 527 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 OR4G11P-202ENST00000642116 1414 ntBASIC2.47□□□□□ -2.01
HLA-DPB1P04440 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DPB1P04440 AC002546.1-201ENST00000588041 2504 ntBASIC2.46□□□□□ -2.01
HLA-DPB1P04440 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 RNU6-343P-201ENST00000364709 104 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 RNU1-140P-201ENST00000365040 165 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 RNU6-851P-201ENST00000384565 107 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 RNU6-882P-201ENST00000391025 103 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 MTND4P13-201ENST00000402078 1023 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL136372.1-201ENST00000403060 228 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 RNU4-65P-201ENST00000410473 140 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL137014.1-201ENST00000420490 1226 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 RPS20P5-201ENST00000434808 360 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 RPL17P49-201ENST00000443728 411 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL589880.1-201ENST00000448271 287 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 S100A11P2-201ENST00000467589 312 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC117522.3-201ENST00000507974 584 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 OR10V3P-201ENST00000525712 725 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 VIS1.1-201ENST00000610517 203 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC006111.3-201ENST00000622137 383 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL445984.1-201ENST00000637834 659 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC006378.2-201ENST00000623178 2476 ntBASIC2.46□□□□□ -2.02
HLA-DPB1P04440 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DPB1P04440 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 SNORD116.1-201ENST00000365628 92 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 SNORA44-201ENST00000384584 132 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AL592310.1-201ENST00000414330 671 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 MRPL50P2-201ENST00000416821 482 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AL356320.2-201ENST00000417263 507 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 RPS3AP37-201ENST00000419176 745 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC004866.2-201ENST00000438285 481 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 NANOGNBP1-201ENST00000448444 480 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 snoU109.3-201ENST00000459477 145 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 RPL21P131-201ENST00000497298 483 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC111000.2-201ENST00000507775 550 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 XKRY-201ENST00000510392 1100 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC006499.2-201ENST00000513470 337 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC017037.2-201ENST00000513850 890 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 SNORA74D-201ENST00000516404 141 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 HSPA8P13-201ENST00000523715 472 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC022690.1-201ENST00000526681 550 ntBASIC2.45□□□□□ -2.02
HLA-DPB1P04440 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DPB1P04440 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms