Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.36□□□□□ -2.03
MT-ND4P03905 RNU2-42P-201ENST00000410697 113 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AL512649.1-201ENST00000428997 581 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 GTF2IP7-202ENST00000436677 309 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AL513043.1-201ENST00000439124 535 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 RAC1P7-201ENST00000445367 377 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AL359385.1-201ENST00000456509 365 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 RPS15AP17-201ENST00000470598 390 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.36□□□□□ -2.03
MT-ND4P03905 SNORA70.16-201ENST00000516390 95 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 CR383656.7-201ENST00000548164 174 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AC012493.2-201ENST00000595083 291 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 RPL12P50-201ENST00000603116 116 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC005332.6-201ENST00000613178 446 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC253576.2-201ENST00000618815 580 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC010297.1-201ENST00000623948 149 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC079228.1-201ENST00000624774 1049 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AC110079.1-202ENST00000635213 138 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.36□□□□□ -2.03
MT-ND4P03905 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND4P03905 TAB3P1-202ENST00000452645 1634 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MT-ND4P03905 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MT-ND4P03905 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
MT-ND4P03905 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
MT-ND4P03905 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MT-ND4P03905 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MT-ND4P03905 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MT-ND4P03905 RNU6-216P-201ENST00000363282 104 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 RNU5D-1-201ENST00000363299 116 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
MT-ND4P03905 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MT-ND4P03905 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MT-ND4P03905 RN7SKP27-201ENST00000410684 333 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AL161449.1-201ENST00000414531 1199 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.35□□□□□ -2.03
MT-ND4P03905 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 PTP4A1P7-201ENST00000423476 514 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND4P03905 RPL7P44-201ENST00000424827 742 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC007742.1-201ENST00000425789 329 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AL590233.1-201ENST00000430017 456 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 MTND2P5-201ENST00000432656 1006 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 ELOCP26-201ENST00000436067 329 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND4P03905 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND4P03905 MTCYBP11-201ENST00000447254 1109 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND4P03905 NIPA2P5-201ENST00000452282 464 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.35□□□□□ -2.03
MT-ND4P03905 AC026410.2-201ENST00000460281 156 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AP001992.1-205ENST00000462248 379 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.35□□□□□ -2.03
MT-ND4P03905 RPS27P27-201ENST00000498779 255 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 SUMO2P5-201ENST00000506790 245 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.35□□□□□ -2.03
MT-ND4P03905 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND4P03905 AC025881.1-201ENST00000518851 512 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MT-ND4P03905 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND4P03905 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND4P03905 AC104072.1-201ENST00000568817 668 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 OR4K8P-201ENST00000578842 1048 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.35□□□□□ -2.03
MT-ND4P03905 AC024560.3-201ENST00000608482 349 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC084824.4-201ENST00000620106 731 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC004009.2-201ENST00000623016 728 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC120349.2-201ENST00000625002 298 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 AC107982.1-201ENST00000507171 1300 ntBASIC2.35□□□□□ -2.03
MT-ND4P03905 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.35□□□□□ -2.03
MT-ND4P03905 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MT-ND4P03905 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
MT-ND4P03905 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MT-ND4P03905 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 Y_RNA.578-201ENST00000390903 88 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 RNA5SP210-201ENST00000391034 120 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 SNORA48.5-201ENST00000391143 135 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AL389915.1-201ENST00000422463 466 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC019178.2-201ENST00000423595 505 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AC092427.1-201ENST00000439177 601 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MT-ND4P03905 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
MT-ND4P03905 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MT-ND4P03905 SNRPGP6-201ENST00000451124 220 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AL353691.1-201ENST00000451332 387 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms