Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU5A-2P-201ENST00000384337 116 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 SNORD65-201ENST00000391079 73 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AL360182.1-201ENST00000397433 468 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 RPL31P1-201ENST00000398116 372 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 RPS3AP24-201ENST00000407896 734 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 RNU2-66P-201ENST00000410650 161 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 RNA5SP21-201ENST00000410917 96 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 VTA1P1-201ENST00000414044 866 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 Z75741.2-201ENST00000417272 1167 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.39□□□□□ -1.87
COL2A1P02458 IPMKP1-201ENST00000425988 855 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 FO393419.3-201ENST00000428741 282 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 SNRPEP8-201ENST00000442866 260 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 RPL36AP33-201ENST00000450395 310 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 snoU13.26-201ENST00000459452 105 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 RN7SL633P-201ENST00000488974 297 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL2A1P02458 RPL37P25-201ENST00000507308 276 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AC034159.1-201ENST00000513885 583 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.39□□□□□ -1.87
COL2A1P02458 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.39□□□□□ -1.87
COL2A1P02458 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL2A1P02458 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.39□□□□□ -1.87
COL2A1P02458 AC087481.2-201ENST00000565492 330 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.39□□□□□ -1.87
COL2A1P02458 AC091805.2-201ENST00000603848 235 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AC018618.2-201ENST00000604770 446 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AF250324.2-201ENST00000608299 610 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 AC095031.1-201ENST00000623685 672 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 OR1S1-201ENST00000624470 978 ntBASIC3.39□□□□□ -1.87
COL2A1P02458 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.39□□□□□ -1.87
COL2A1P02458 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
COL2A1P02458 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL2A1P02458 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.39□□□□□ -1.87
COL2A1P02458 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.38□□□□□ -1.87
COL2A1P02458 OR4G1P-202ENST00000641173 1788 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.38□□□□□ -1.87
COL2A1P02458 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL2A1P02458 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.38□□□□□ -1.87
COL2A1P02458 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL2A1P02458 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
COL2A1P02458 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.38□□□□□ -1.87
COL2A1P02458 OR1L1-202ENST00000373686 1083 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 Y_RNA.554-201ENST00000384672 102 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 PAICSP7-201ENST00000419829 962 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AL139421.1-201ENST00000423010 169 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AC063976.3-201ENST00000426849 329 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 MTCO2P19-201ENST00000427513 598 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.38□□□□□ -1.87
COL2A1P02458 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.38□□□□□ -1.87
COL2A1P02458 HMGB1P45-201ENST00000435986 653 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AC241584.1-201ENST00000438469 1241 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 TRIM60P18-201ENST00000441518 828 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AL592437.1-201ENST00000443781 492 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 UBE2V1P7-201ENST00000446395 340 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 TPMTP4-201ENST00000450749 678 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.38□□□□□ -1.87
COL2A1P02458 SNRPGP9-201ENST00000456025 225 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.38□□□□□ -1.87
COL2A1P02458 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.38□□□□□ -1.87
COL2A1P02458 MTCO3P38-201ENST00000468910 766 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.38□□□□□ -1.87
COL2A1P02458 AC096751.1-202ENST00000502691 1067 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.38□□□□□ -1.87
COL2A1P02458 AC109464.2-201ENST00000510242 943 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.38□□□□□ -1.87
COL2A1P02458 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.38□□□□□ -1.87
COL2A1P02458 AC074029.1-201ENST00000552531 1044 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AC044913.1-201ENST00000557200 430 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AC092325.1-201ENST00000566449 554 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 ISCA1P3-201ENST00000577104 373 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.38□□□□□ -1.87
COL2A1P02458 AC091965.4-201ENST00000607691 587 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 AL159169.2-201ENST00000610061 1269 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.38□□□□□ -1.87
COL2A1P02458 AC243829.7-201ENST00000633081 225 ntBASIC3.38□□□□□ -1.87
COL2A1P02458 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.38□□□□□ -1.87
COL2A1P02458 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.38□□□□□ -1.87
COL2A1P02458 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL2A1P02458 RNU6-859P-201ENST00000362728 107 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 RNU4-21P-201ENST00000362802 126 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 Y_RNA.408-201ENST00000383987 102 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 RNU6-253P-201ENST00000384730 105 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 EIF1P1-201ENST00000421436 341 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 MTND3P23-201ENST00000431980 347 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.37□□□□□ -1.87
COL2A1P02458 AL121601.2-201ENST00000438019 707 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 HMGB1P18-201ENST00000438801 619 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 MTND1P30-201ENST00000441241 901 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 RPS26P30-201ENST00000443431 335 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.37□□□□□ -1.87
COL2A1P02458 AC092001.1-201ENST00000453012 261 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.37□□□□□ -1.87
COL2A1P02458 AC147055.4-201ENST00000504399 745 ntBASIC3.37□□□□□ -1.87
COL2A1P02458 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.37□□□□□ -1.87
COL2A1P02458 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms