Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC090453.1-201ENST00000495560 436 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC083906.5-201ENST00000503722 328 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC114322.1-201ENST00000506771 926 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 HMGB1P28-201ENST00000507778 552 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 KLHL2P1-201ENST00000508691 521 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC009812.2-201ENST00000517657 457 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 SLC2A13P1-201ENST00000531560 322 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC015688.2-201ENST00000584523 262 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC008739.3-201ENST00000603262 127 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC119501.1-201ENST00000603646 475 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AP001330.4-201ENST00000604350 154 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC008277.2-201ENST00000605196 797 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC025588.4-201ENST00000615802 908 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AC009269.6-201ENST00000621778 588 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
HLA-DQB1P01920 AP002907.1-201ENST00000606361 1430 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 CDR1-202ENST00000625883 1485 ntBASIC2.32□□□□□ -2.04
HLA-DQB1P01920 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 SNORA14A-201ENST00000364773 135 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 ATP5F1P3-201ENST00000397213 657 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AL356967.1-201ENST00000406305 431 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 RNU2-47P-201ENST00000410649 186 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 RPS15AP38-201ENST00000413110 372 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AL389915.1-201ENST00000422463 466 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 NIPA2P1-201ENST00000426223 976 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 MTATP6P4-201ENST00000427725 675 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AL590233.1-201ENST00000430017 456 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 SNRPEP4-201ENST00000435815 279 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC005297.2-201ENST00000450430 606 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 RPL18AP17-201ENST00000455326 198 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 FCF1P6-201ENST00000456841 595 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 COX7A2P2-201ENST00000505291 250 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC010625.1-201ENST00000511296 403 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC008837.2-201ENST00000513076 418 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 SCGB1D5P-201ENST00000515134 247 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 MED28P6-201ENST00000558776 231 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 H3F3AP1-201ENST00000559984 334 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC090695.1-201ENST00000561269 1222 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC053481.3-201ENST00000577881 843 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 FAM60BP-201ENST00000578364 658 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC006539.2-201ENST00000601729 572 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC245389.1-201ENST00000605141 529 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 YPEL5P2-201ENST00000605553 359 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 PART1_2.1-201ENST00000612397 250 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC095031.1-201ENST00000623685 672 ntBASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
HLA-DQB1P01920 AC000403.1-201ENST00000613696 3585 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 Z82195.2-201ENST00000612348 18351 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 RNVU1-14-201ENST00000384770 164 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 MIR7-3-201ENST00000384898 110 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 HMGB1P17-201ENST00000403495 628 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 RNA5SP80-201ENST00000410475 111 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 RNA5SP492-201ENST00000411330 114 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 RPL21P32-201ENST00000419877 477 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 USP9YP36-201ENST00000424581 829 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 RPS20P5-201ENST00000434808 360 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQB1P01920 MTND2P39-201ENST00000457230 764 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 SNORA84-201ENST00000459229 133 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 AC104472.2-201ENST00000469035 601 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 RPS23P3-201ENST00000470993 430 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 AC111000.2-201ENST00000507775 550 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 AC006499.2-201ENST00000513470 337 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 SNORA31.1-201ENST00000515993 133 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 SNORA31.5-201ENST00000516190 133 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 SNORA74D-201ENST00000516404 141 ntBASIC2.3□□□□□ -2.04
HLA-DQB1P01920 AP002404.1-201ENST00000532005 451 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms