Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 IGLVIV-53-201ENST00000520107 367 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 MTCYBP41-201ENST00000528913 1123 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AC090615.1-201ENST00000577519 154 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 NRBF2P1-201ENST00000587407 859 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AL161729.4-201ENST00000604650 476 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AC098614.4-201ENST00000607601 462 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AC009237.17-201ENST00000618111 748 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AL596245.1-201ENST00000618994 362 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AC138649.3-201ENST00000622154 254 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AL732618.1-201ENST00000623251 301 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AL359757.2-201ENST00000624309 274 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 PISRT1-201ENST00000626175 531 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAPGEF3O95398 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAPGEF3O95398 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAPGEF3O95398 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 UBE3AP2-201ENST00000429033 2259 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 NUP58P1-201ENST00000502546 1738 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAPGEF3O95398 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAPGEF3O95398 FRG1BP-201ENST00000278882 761 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 MIR181A1-201ENST00000385026 110 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 RN7SKP53-201ENST00000411337 315 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC063979.1-201ENST00000415539 377 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC007742.1-201ENST00000425789 329 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 PSMA6P3-201ENST00000428242 164 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 ELOCP26-201ENST00000436067 329 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 BX276092.4-201ENST00000452056 248 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 RPS3AP17-201ENST00000472594 777 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC087385.1-201ENST00000475062 312 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 RPL9P6-201ENST00000492764 598 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 RNU6-714P-201ENST00000516963 103 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 RNU6-201P-201ENST00000517100 61 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 TPRKBP2-201ENST00000565969 475 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 CYP4A43P-201ENST00000568156 121 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 MIR3913-1-201ENST00000577744 102 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 MIR4276-201ENST00000584832 70 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC011468.4-201ENST00000603942 409 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC091304.9-201ENST00000612091 226 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RAPGEF3O95398 AC118273.1-201ENST00000525324 3006 ntBASIC5.28□□□□□ -1.56
RAPGEF3O95398 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 NEAT1-202ENST00000501122 22743 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC007656.2-201ENST00000624902 4547 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAPGEF3O95398 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAPGEF3O95398 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 RNU6-853P-201ENST00000364306 107 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 RPS20P2-201ENST00000402520 389 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 FCF1P10-201ENST00000407590 479 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 SPA17P1-201ENST00000416656 452 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC009961.2-201ENST00000435771 251 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 GAPDHP17-201ENST00000449858 1001 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 RN7SKP277-201ENST00000516895 283 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC034268.2-201ENST00000571784 482 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 ATP5A1P2-202ENST00000616464 443 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 AL137790.1-201ENST00000634283 177 ntBASIC5.27□□□□□ -1.57
RAPGEF3O95398 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms