Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VAPBO95292 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAPBO95292 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
VAPBO95292 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.51□□□□□ -2.01
VAPBO95292 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.51□□□□□ -2.01
VAPBO95292 FRG1BP-201ENST00000278882 761 ntBASIC2.51□□□□□ -2.01
VAPBO95292 RNU6-839P-201ENST00000363347 108 ntBASIC2.51□□□□□ -2.01
VAPBO95292 RNU1-105P-201ENST00000363470 161 ntBASIC2.51□□□□□ -2.01
VAPBO95292 SNORA80A-201ENST00000363922 136 ntBASIC2.51□□□□□ -2.01
VAPBO95292 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AL139039.1-201ENST00000401900 692 ntBASIC2.51□□□□□ -2.01
VAPBO95292 RNU2-28P-201ENST00000410457 189 ntBASIC2.51□□□□□ -2.01
VAPBO95292 RNU6-193P-201ENST00000410977 107 ntBASIC2.51□□□□□ -2.01
VAPBO95292 TAF13P2-201ENST00000416876 286 ntBASIC2.51□□□□□ -2.01
VAPBO95292 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.51□□□□□ -2.01
VAPBO95292 RPL7P37-201ENST00000425095 738 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC063976.3-201ENST00000426849 329 ntBASIC2.51□□□□□ -2.01
VAPBO95292 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPBO95292 RPS12P2-201ENST00000439728 269 ntBASIC2.51□□□□□ -2.01
VAPBO95292 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPBO95292 RNF2P1-201ENST00000442955 1010 ntBASIC2.51□□□□□ -2.01
VAPBO95292 GXYLT1P1-201ENST00000446657 490 ntBASIC2.51□□□□□ -2.01
VAPBO95292 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VAPBO95292 OR51B8P-201ENST00000449892 769 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC234775.1-201ENST00000454247 670 ntBASIC2.51□□□□□ -2.01
VAPBO95292 MTND4LP3-201ENST00000468320 276 ntBASIC2.51□□□□□ -2.01
VAPBO95292 RPL30P5-201ENST00000494923 336 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VAPBO95292 AC025881.1-201ENST00000518851 512 ntBASIC2.51□□□□□ -2.01
VAPBO95292 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.51□□□□□ -2.01
VAPBO95292 AC026616.1-201ENST00000523157 525 ntBASIC2.51□□□□□ -2.01
VAPBO95292 CASP1P1-201ENST00000526345 212 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPBO95292 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPBO95292 CR383656.7-201ENST00000548164 174 ntBASIC2.51□□□□□ -2.01
VAPBO95292 SETP7-201ENST00000552169 453 ntBASIC2.51□□□□□ -2.01
VAPBO95292 MTCYBP27-201ENST00000555160 670 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.51□□□□□ -2.01
VAPBO95292 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPBO95292 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.51□□□□□ -2.01
VAPBO95292 TPMTP1-201ENST00000592307 737 ntBASIC2.51□□□□□ -2.01
VAPBO95292 BNIP3P22-201ENST00000593399 556 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.51□□□□□ -2.01
VAPBO95292 AL137843.1-201ENST00000605078 385 ntBASIC2.51□□□□□ -2.01
VAPBO95292 OR2AS2P-201ENST00000606902 342 ntBASIC2.51□□□□□ -2.01
VAPBO95292 DUXAP10-204ENST00000612052 616 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC025588.4-201ENST00000615802 908 ntBASIC2.51□□□□□ -2.01
VAPBO95292 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VAPBO95292 AC103798.2-201ENST00000624292 632 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC092608.2-201ENST00000624427 218 ntBASIC2.51□□□□□ -2.01
VAPBO95292 AC026634.1-201ENST00000634369 198 ntBASIC2.51□□□□□ -2.01
VAPBO95292 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAPBO95292 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAPBO95292 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
VAPBO95292 RNU6-932P-201ENST00000391108 106 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AL162578.1-201ENST00000406202 378 ntBASIC2.5□□□□□ -2.01
VAPBO95292 SFR1P2-201ENST00000421841 730 ntBASIC2.5□□□□□ -2.01
VAPBO95292 MTCO3P1-205ENST00000422088 832 ntBASIC2.5□□□□□ -2.01
VAPBO95292 MTCO2P17-201ENST00000424336 677 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AC019097.1-201ENST00000424783 735 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AL512661.1-201ENST00000434586 1253 ntBASIC2.5□□□□□ -2.01
VAPBO95292 RPL23AP83-201ENST00000434984 473 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AC129850.1-201ENST00000436203 508 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AL109741.2-201ENST00000455561 343 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AC013828.1-201ENST00000481845 158 ntBASIC2.5□□□□□ -2.01
VAPBO95292 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPBO95292 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPBO95292 AC147055.4-201ENST00000504399 745 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AC091860.1-201ENST00000505723 432 ntBASIC2.5□□□□□ -2.01
VAPBO95292 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.5□□□□□ -2.01
VAPBO95292 OR5AK1P-201ENST00000524837 922 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AL731537.2-201ENST00000561565 951 ntBASIC2.5□□□□□ -2.01
VAPBO95292 HMGB1P6-201ENST00000569046 646 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AL671309.1-201ENST00000603750 544 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AL161734.1-201ENST00000609720 557 ntBASIC2.5□□□□□ -2.01
VAPBO95292 TUG1_1.1-201ENST00000610654 145 ntBASIC2.5□□□□□ -2.01
VAPBO95292 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
VAPBO95292 VN1R74P-201ENST00000613259 503 ntBASIC2.5□□□□□ -2.01
VAPBO95292 CRYM-AS1-204ENST00000637983 556 ntBASIC2.5□□□□□ -2.01
VAPBO95292 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VAPBO95292 AC009812.4-201ENST00000569134 1805 ntBASIC2.49□□□□□ -2.01
VAPBO95292 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VAPBO95292 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
VAPBO95292 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
VAPBO95292 RNU6-549P-201ENST00000384433 107 ntBASIC2.49□□□□□ -2.01
VAPBO95292 MIR483-201ENST00000385070 76 ntBASIC2.49□□□□□ -2.01
VAPBO95292 MIR27B-201ENST00000385129 97 ntBASIC2.49□□□□□ -2.01
VAPBO95292 AL356057.2-201ENST00000403318 432 ntBASIC2.49□□□□□ -2.01
VAPBO95292 RNU2-43P-201ENST00000410306 190 ntBASIC2.49□□□□□ -2.01
VAPBO95292 BEND7P1-201ENST00000422058 457 ntBASIC2.49□□□□□ -2.01
VAPBO95292 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.49□□□□□ -2.01
VAPBO95292 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.49□□□□□ -2.01
VAPBO95292 PSMA6P3-201ENST00000428242 164 ntBASIC2.49□□□□□ -2.01
VAPBO95292 AL590383.1-201ENST00000428602 75 ntBASIC2.49□□□□□ -2.01
VAPBO95292 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.49□□□□□ -2.01
VAPBO95292 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.49□□□□□ -2.01
VAPBO95292 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPBO95292 snoU13.28-201ENST00000459235 104 ntBASIC2.49□□□□□ -2.01
VAPBO95292 AC096576.1-201ENST00000489014 359 ntBASIC2.49□□□□□ -2.01
VAPBO95292 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms