Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA12O60330 DEFB108F-201ENST00000344638 222 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 Y_RNA.256-201ENST00000364594 104 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 RNA5SP189-201ENST00000364920 115 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 RNU6-641P-201ENST00000384006 107 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 RNU6-483P-201ENST00000384088 108 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 RNU6-39P-201ENST00000384344 107 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 MIR454-201ENST00000390180 115 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AL359634.1-202ENST00000404721 284 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 ZNF90P2-204ENST00000419323 1075 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 MTATP6P4-201ENST00000427725 675 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC024082.2-201ENST00000434771 238 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 BNIP3P2-201ENST00000441221 577 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA12O60330 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 snoU13.4-201ENST00000458916 104 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 RNU7-63P-201ENST00000459054 62 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 SNORA84-201ENST00000459229 133 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC116562.3-201ENST00000506136 177 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC004062.1-201ENST00000509926 645 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC005921.1-201ENST00000510589 286 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 GMPSP1-201ENST00000514075 579 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 RNU6-390P-201ENST00000516259 103 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 SNORD27.1-201ENST00000516319 72 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC068587.5-201ENST00000528506 175 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 TRAV8-5-201ENST00000537369 341 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 ARL2BPP2-201ENST00000550907 489 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC055876.1-202ENST00000567053 138 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC005255.1-201ENST00000593748 216 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 BPIFA4P-203ENST00000603168 689 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC079587.1-201ENST00000603846 277 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC020634.1-201ENST00000608701 549 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AL031666.3-201ENST00000609320 1006 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AC093788.1-201ENST00000609356 927 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AL158196.1-201ENST00000616786 434 ntBASIC4.35□□□□□ -1.71
PCDHGA12O60330 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA12O60330 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PCDHGA12O60330 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA12O60330 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA12O60330 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA12O60330 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA12O60330 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA12O60330 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA12O60330 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA12O60330 MIR331-201ENST00000362302 94 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 RNU6-1283P-201ENST00000365314 105 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AL359837.1-201ENST00000381357 287 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 MIR1-2-201ENST00000384961 85 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 RNU2-36P-201ENST00000410361 191 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 AL353193.1-201ENST00000421444 268 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 PDSS1P1-201ENST00000422953 1114 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 AL132765.1-201ENST00000434165 553 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 SEPT14P3-201ENST00000439401 183 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 AL732372.2-207ENST00000445840 183 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC012671.1-201ENST00000451912 203 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 SEPT14P2-201ENST00000453405 183 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 RNU7-182P-201ENST00000459009 62 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AP000873.1-201ENST00000463987 400 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC010631.1-201ENST00000474150 156 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 RPL31P13-201ENST00000484151 370 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 SEPT14P4-201ENST00000513445 186 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC134698.4-201ENST00000523451 826 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 FO082796.1-201ENST00000523795 183 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AK6P1-201ENST00000540219 478 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC006130.2-201ENST00000586202 326 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC174048.1-201ENST00000603389 144 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AC010591.1-201ENST00000603941 649 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AP000907.4-201ENST00000604143 237 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 AP001596.2-201ENST00000608410 312 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 SDR42E1P2-201ENST00000614861 481 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA12O60330 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA12O60330 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA12O60330 CKAP2P1-201ENST00000555477 2049 ntBASIC4.34□□□□□ -1.71
PCDHGA12O60330 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHGA12O60330 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHGA12O60330 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms