Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL031176.1-201ENST00000604554 466 ntBASIC3.01□□□□□ -1.93
LCMT2O60294 AC013244.3-201ENST00000605614 388 ntBASIC3.01□□□□□ -1.93
LCMT2O60294 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.01□□□□□ -1.93
LCMT2O60294 AL079343.1-201ENST00000572358 1771 ntBASIC3.01□□□□□ -1.93
LCMT2O60294 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LCMT2O60294 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LCMT2O60294 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.01□□□□□ -1.93
LCMT2O60294 AL022578.1-201ENST00000439330 1433 ntBASIC3.01□□□□□ -1.93
LCMT2O60294 OR4G11P-202ENST00000642116 1414 ntBASIC3.01□□□□□ -1.93
LCMT2O60294 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
LCMT2O60294 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
LCMT2O60294 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LCMT2O60294 SNORA14A-201ENST00000364773 135 ntBASIC3□□□□□ -1.93
LCMT2O60294 IARS-201ENST00000375627 697 ntTSL 3 BASIC3□□□□□ -1.93
LCMT2O60294 SNORA7.4-201ENST00000384249 137 ntBASIC3□□□□□ -1.93
LCMT2O60294 RNU6-882P-201ENST00000391025 103 ntBASIC3□□□□□ -1.93
LCMT2O60294 TPMTP2-201ENST00000414372 726 ntBASIC3□□□□□ -1.93
LCMT2O60294 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
LCMT2O60294 MTCYBP38-201ENST00000417160 1123 ntBASIC3□□□□□ -1.93
LCMT2O60294 AL353678.1-201ENST00000422735 741 ntBASIC3□□□□□ -1.93
LCMT2O60294 AL953862.1-201ENST00000423016 168 ntBASIC3□□□□□ -1.93
LCMT2O60294 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3□□□□□ -1.93
LCMT2O60294 AL591719.1-201ENST00000444669 744 ntBASIC3□□□□□ -1.93
LCMT2O60294 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3□□□□□ -1.93
LCMT2O60294 AC108860.1-201ENST00000484521 383 ntBASIC3□□□□□ -1.93
LCMT2O60294 AC023424.2-201ENST00000493479 777 ntBASIC3□□□□□ -1.93
LCMT2O60294 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3□□□□□ -1.93
LCMT2O60294 AC034244.1-201ENST00000507687 207 ntBASIC3□□□□□ -1.93
LCMT2O60294 HSPE1P23-201ENST00000509838 286 ntBASIC3□□□□□ -1.93
LCMT2O60294 AC093677.1-201ENST00000514414 678 ntBASIC3□□□□□ -1.93
LCMT2O60294 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
LCMT2O60294 RNA5SP217-201ENST00000515959 91 ntBASIC3□□□□□ -1.93
LCMT2O60294 RNU6-150P-201ENST00000516237 95 ntBASIC3□□□□□ -1.93
LCMT2O60294 FAM60DP-201ENST00000524174 632 ntBASIC3□□□□□ -1.93
LCMT2O60294 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3□□□□□ -1.93
LCMT2O60294 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
LCMT2O60294 AC023050.2-201ENST00000544968 387 ntBASIC3□□□□□ -1.93
LCMT2O60294 CR383656.7-201ENST00000548164 174 ntBASIC3□□□□□ -1.93
LCMT2O60294 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3□□□□□ -1.93
LCMT2O60294 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3□□□□□ -1.93
LCMT2O60294 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3□□□□□ -1.93
LCMT2O60294 MIR5004-201ENST00000579078 107 ntBASIC3□□□□□ -1.93
LCMT2O60294 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3□□□□□ -1.93
LCMT2O60294 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
LCMT2O60294 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3□□□□□ -1.93
LCMT2O60294 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3□□□□□ -1.93
LCMT2O60294 AL591516.1-201ENST00000611326 274 ntBASIC3□□□□□ -1.93
LCMT2O60294 AP002782.1-201ENST00000623107 614 ntBASIC3□□□□□ -1.93
LCMT2O60294 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3□□□□□ -1.93
LCMT2O60294 MIR3651-201ENST00000630427 90 ntBASIC3□□□□□ -1.93
LCMT2O60294 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3□□□□□ -1.93
LCMT2O60294 AC090740.1-201ENST00000623193 2262 ntBASIC3□□□□□ -1.93
LCMT2O60294 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
LCMT2O60294 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LCMT2O60294 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LCMT2O60294 AC005539.1-201ENST00000443768 1479 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LCMT2O60294 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LCMT2O60294 SNORA38.1-201ENST00000364172 131 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC110754.1-201ENST00000399740 601 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LCMT2O60294 SNORA11.1-201ENST00000408133 129 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.99□□□□□ -1.93
LCMT2O60294 USP9YP33-201ENST00000412220 421 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC007899.1-201ENST00000412776 775 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 HIGD1AP15-201ENST00000416198 280 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 TMEM167AP1-201ENST00000423409 219 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC019178.2-201ENST00000423595 505 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 EZH2P1-201ENST00000431167 291 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.99□□□□□ -1.93
LCMT2O60294 USP9YP35-201ENST00000435696 412 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 MTND4P6-201ENST00000438297 472 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 HSPE1P28-201ENST00000443139 211 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 EEF1E1P1-201ENST00000446998 430 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AL590664.1-201ENST00000448065 339 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 SUMO2P2-201ENST00000456482 255 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 RPL31P50-201ENST00000471002 296 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC068724.1-201ENST00000487100 792 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 SNORA70.16-201ENST00000516390 95 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 RN7SKP287-201ENST00000516546 266 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC022861.1-201ENST00000522981 663 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LCMT2O60294 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LCMT2O60294 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 AC087465.1-201ENST00000560574 245 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC055876.1-202ENST00000567053 138 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.99□□□□□ -1.93
LCMT2O60294 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.99□□□□□ -1.93
LCMT2O60294 AC022022.2-201ENST00000602989 360 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AC093424.1-201ENST00000604999 338 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AL592221.1-201ENST00000605266 382 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AL133507.1-201ENST00000605269 557 ntBASIC2.99□□□□□ -1.93
LCMT2O60294 AL390208.1-201ENST00000605885 644 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms