Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.06□□□□□ -2.08
SSNA1O43805 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.06□□□□□ -2.08
SSNA1O43805 AL049874.1-201ENST00000489560 388 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 GTF2IP9-201ENST00000502460 301 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.06□□□□□ -2.08
SSNA1O43805 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.06□□□□□ -2.08
SSNA1O43805 RNU6-1256P-201ENST00000516539 103 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 RNU6-1282P-201ENST00000516735 96 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.06□□□□□ -2.08
SSNA1O43805 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SSNA1O43805 AP001317.1-201ENST00000531194 960 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 AP000916.1-201ENST00000533869 835 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SSNA1O43805 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.06□□□□□ -2.08
SSNA1O43805 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SSNA1O43805 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.06□□□□□ -2.08
SSNA1O43805 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 RN7SL622P-201ENST00000585292 275 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 RPS15AP11-201ENST00000594193 385 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 TUG1_1.1-201ENST00000610654 145 ntBASIC2.06□□□□□ -2.08
SSNA1O43805 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.06□□□□□ -2.08
SSNA1O43805 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
SSNA1O43805 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SSNA1O43805 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
SSNA1O43805 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SSNA1O43805 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.05□□□□□ -2.08
SSNA1O43805 AC022336.2-201ENST00000568966 2538 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 SNORA3A-201ENST00000364113 130 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 RNU6-301P-201ENST00000384277 107 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 RNU6-883P-201ENST00000384597 107 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 MIR524-201ENST00000385242 87 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.05□□□□□ -2.08
SSNA1O43805 AC241584.1-201ENST00000438469 1241 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.05□□□□□ -2.08
SSNA1O43805 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.05□□□□□ -2.08
SSNA1O43805 GTF2IP12-201ENST00000456547 356 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 HSPE1P6-201ENST00000479457 291 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 LARP1BP2-201ENST00000486594 519 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AC006445.1-201ENST00000491925 405 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.05□□□□□ -2.08
SSNA1O43805 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.05□□□□□ -2.08
SSNA1O43805 CDH12P4-201ENST00000517835 295 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 CDH12P3-201ENST00000517935 295 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 CDH12P1-201ENST00000518435 295 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 HMGB1P1-201ENST00000522557 636 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AP002748.2-201ENST00000528671 348 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 NDUFS5P6-201ENST00000529136 295 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.05□□□□□ -2.08
SSNA1O43805 AC024224.1-201ENST00000538284 609 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AL391261.3-201ENST00000557194 520 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AC009127.3-201ENST00000570531 403 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.05□□□□□ -2.08
SSNA1O43805 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.05□□□□□ -2.08
SSNA1O43805 MIR3616-201ENST00000584070 92 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 HMGN2P15-201ENST00000585707 270 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AC005332.10-201ENST00000612725 619 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 VN1R9P-201ENST00000614184 867 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 MIR6730-201ENST00000622213 67 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AL512506.2-201ENST00000624472 458 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 AL590396.4-201ENST00000636779 956 ntBASIC2.05□□□□□ -2.08
SSNA1O43805 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
SSNA1O43805 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.05□□□□□ -2.08
SSNA1O43805 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.05□□□□□ -2.08
SSNA1O43805 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.05□□□□□ -2.08
SSNA1O43805 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.05□□□□□ -2.08
SSNA1O43805 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SSNA1O43805 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SSNA1O43805 SNORD62.1-201ENST00000362541 86 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 RNA5SP456-201ENST00000364002 114 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSNA1O43805 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSNA1O43805 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSNA1O43805 RNU6-1328P-201ENST00000410938 106 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC092634.6-201ENST00000418558 192 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC005300.1-201ENST00000428401 373 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AL590383.1-201ENST00000428602 75 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.04□□□□□ -2.08
SSNA1O43805 AL356867.1-201ENST00000429623 299 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 USP12PX-201ENST00000432383 1057 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 PGBD4P3-201ENST00000440731 581 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.04□□□□□ -2.08
SSNA1O43805 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.04□□□□□ -2.08
SSNA1O43805 DDX10P1-201ENST00000448545 1933 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.04□□□□□ -2.08
SSNA1O43805 RPS4XP10-201ENST00000465034 731 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC118282.2-201ENST00000508739 374 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC022483.1-201ENST00000514020 567 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.04□□□□□ -2.08
SSNA1O43805 AP000889.2-201ENST00000532684 490 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.04□□□□□ -2.08
SSNA1O43805 AC090502.2-201ENST00000549267 280 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC087465.1-201ENST00000560574 245 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC025281.1-201ENST00000567026 265 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.04□□□□□ -2.08
SSNA1O43805 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.04□□□□□ -2.08
SSNA1O43805 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.04□□□□□ -2.08
SSNA1O43805 SNORD53-201ENST00000579969 78 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms