Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU4-55P-201ENST00000410731 137 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RNU6-272P-201ENST00000411028 104 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 BX295541.1-201ENST00000417774 250 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RPS15AP40-201ENST00000419621 391 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.83□□□□□ -1.8
SMAD6O43541 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SMAD6O43541 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 BX890604.2-201ENST00000427883 474 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 TIMM9P3-201ENST00000428659 274 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AF228730.2-201ENST00000438784 848 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 RPL23AP33-201ENST00000442301 452 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 AL133547.1-201ENST00000448546 220 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 GAPDHP17-201ENST00000449858 1001 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 TRGVB-201ENST00000453257 471 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.83□□□□□ -1.8
SMAD6O43541 RNF138P1-201ENST00000502765 546 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.83□□□□□ -1.8
SMAD6O43541 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 RNU6-150P-201ENST00000516237 95 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 Y_RNA.704-201ENST00000516851 102 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RN7SKP283-201ENST00000517197 270 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.83□□□□□ -1.8
SMAD6O43541 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 OR5AP1P-201ENST00000529730 940 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.83□□□□□ -1.8
SMAD6O43541 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.83□□□□□ -1.8
SMAD6O43541 MIR4429-201ENST00000580105 73 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 MIR5187-201ENST00000583479 76 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.83□□□□□ -1.8
SMAD6O43541 UBE2V2P2-201ENST00000587677 504 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.83□□□□□ -1.8
SMAD6O43541 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
SMAD6O43541 AC087045.1-201ENST00000605856 382 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RNU1-30P-201ENST00000606575 163 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AC097468.3-201ENST00000607956 456 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AC112200.1-201ENST00000625015 234 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 MTND1P37-201ENST00000636562 264 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 U6.98-201ENST00000637157 84 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AL022578.1-201ENST00000439330 1433 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMAD6O43541 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.83□□□□□ -1.8
SMAD6O43541 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMAD6O43541 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SMAD6O43541 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMAD6O43541 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMAD6O43541 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMAD6O43541 SNRPEP3-201ENST00000338402 276 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 RNA5SP322-201ENST00000363617 119 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 Y_RNA.573-201ENST00000384763 105 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SMAD6O43541 PTMAP2-201ENST00000397627 327 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 EIF5P1-201ENST00000400019 1231 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 RNU2-6P-201ENST00000411404 190 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.82□□□□□ -1.8
SMAD6O43541 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SMAD6O43541 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 MTCO1P20-201ENST00000425366 358 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.82□□□□□ -1.8
SMAD6O43541 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
SMAD6O43541 AL356535.1-201ENST00000440335 398 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 MTND6P13-201ENST00000443510 523 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 BX322784.1-201ENST00000455793 1077 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 MEMO1P3-201ENST00000459811 302 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 RPL21P129-201ENST00000491732 478 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 AC105914.1-201ENST00000511798 226 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AC025465.4-201ENST00000513422 638 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 RNA5SP164-201ENST00000516533 110 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 RN7SKP277-201ENST00000516895 283 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.82□□□□□ -1.8
SMAD6O43541 FAM92A1P1-201ENST00000528023 890 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.82□□□□□ -1.8
SMAD6O43541 AL391840.1-201ENST00000571144 367 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 MIR4307-201ENST00000582802 84 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.82□□□□□ -1.8
SMAD6O43541 AC008752.3-201ENST00000588113 712 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms