Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC091042.1-201ENST00000579213 173 ntBASIC4.02□□□□□ -1.77
HOXA3O43365 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA3O43365 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA3O43365 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA3O43365 AC174048.1-201ENST00000603389 144 ntBASIC4.02□□□□□ -1.77
HOXA3O43365 AC022893.3-201ENST00000607665 437 ntBASIC4.02□□□□□ -1.77
HOXA3O43365 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXA3O43365 AC008013.2-202ENST00000637965 364 ntBASIC4.02□□□□□ -1.77
HOXA3O43365 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXA3O43365 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
HOXA3O43365 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXA3O43365 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HOXA3O43365 A2MP1-204ENST00000566278 4130 ntBASIC4.02□□□□□ -1.77
HOXA3O43365 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXA3O43365 AC093535.2-201ENST00000624769 2326 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.01□□□□□ -1.77
HOXA3O43365 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
HOXA3O43365 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXA3O43365 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXA3O43365 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXA3O43365 RNA5SP191-201ENST00000362585 102 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 Y_RNA.197-201ENST00000364004 102 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 SNORD116-11-201ENST00000383882 92 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 Y_RNA.395-201ENST00000383945 109 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 RNU6-398P-201ENST00000384143 109 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 Y_RNA.445-201ENST00000384168 102 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 SNORA70.10-201ENST00000384515 134 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 RNU6-1160P-201ENST00000384546 104 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 RNU6-837P-201ENST00000391056 108 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 SNORA77-201ENST00000408716 125 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 RNU2-43P-201ENST00000410306 190 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 AC245054.2-201ENST00000415639 319 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.01□□□□□ -1.77
HOXA3O43365 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXA3O43365 AL139095.3-201ENST00000419672 1203 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 RPL23AP89-201ENST00000439324 255 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 NEFMP1-201ENST00000443423 1006 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 OR1H1P-201ENST00000448731 937 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXA3O43365 TRBV1-201ENST00000476502 284 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 RPL21P103-201ENST00000479921 488 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXA3O43365 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXA3O43365 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXA3O43365 RAB9BP1-201ENST00000519581 626 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 OR4H12P-201ENST00000556269 907 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HOXA3O43365 AC138761.3-201ENST00000579993 334 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 AC233702.9-201ENST00000581528 203 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 MIR5690-201ENST00000583739 73 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 AC023043.2-201ENST00000589678 1026 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 AC234771.5-201ENST00000600161 514 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 CYP2C61P-201ENST00000604072 290 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 AC010632.3-201ENST00000611377 369 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 MIR6839-201ENST00000620425 113 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXA3O43365 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 AC026951.1-201ENST00000559530 2459 ntBASIC4.01□□□□□ -1.77
HOXA3O43365 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA3O43365 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXA3O43365 SCN1A-220ENST00000641603 12506 ntBASIC4□□□□□ -1.77
HOXA3O43365 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA3O43365 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
HOXA3O43365 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA3O43365 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA3O43365 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4□□□□□ -1.77
HOXA3O43365 SNORA33.2-201ENST00000365413 134 ntBASIC4□□□□□ -1.77
HOXA3O43365 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA3O43365 RNU6-393P-201ENST00000384475 107 ntBASIC4□□□□□ -1.77
HOXA3O43365 SNORA16.2-201ENST00000390991 127 ntBASIC4□□□□□ -1.77
HOXA3O43365 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXA3O43365 AL583834.1-201ENST00000406943 343 ntBASIC4□□□□□ -1.77
HOXA3O43365 RNA5SP113-201ENST00000410486 84 ntBASIC4□□□□□ -1.77
HOXA3O43365 AC119751.6-201ENST00000416712 186 ntBASIC4□□□□□ -1.77
HOXA3O43365 SKA2P1-201ENST00000425592 390 ntBASIC4□□□□□ -1.77
HOXA3O43365 AL121871.1-201ENST00000443413 436 ntBASIC4□□□□□ -1.77
HOXA3O43365 AC011753.3-201ENST00000443436 406 ntBASIC4□□□□□ -1.77
HOXA3O43365 AC073264.2-201ENST00000448886 166 ntBASIC4□□□□□ -1.77
HOXA3O43365 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4□□□□□ -1.77
HOXA3O43365 AL591623.2-201ENST00000449978 222 ntBASIC4□□□□□ -1.77
HOXA3O43365 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4□□□□□ -1.77
HOXA3O43365 MRPS31P2-201ENST00000451581 518 ntBASIC4□□□□□ -1.77
HOXA3O43365 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4□□□□□ -1.77
HOXA3O43365 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4□□□□□ -1.77
HOXA3O43365 DYNLL1P5-201ENST00000467158 270 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms