Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXA2O43364 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA2O43364 MAPK10-338ENST00000641647 3362 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXA2O43364 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXA2O43364 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA2O43364 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HOXA2O43364 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 PRO1804-201ENST00000623780 2050 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 RNU6-1317P-201ENST00000364582 104 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 U3.13-201ENST00000364804 214 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 MIR521-1-201ENST00000384902 87 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXA2O43364 RPL21P67-201ENST00000402896 478 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 AL080315.1-201ENST00000406055 466 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 RNA5SP56-201ENST00000410277 118 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 CYCSP10-201ENST00000417973 294 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXA2O43364 AL139148.1-201ENST00000427122 680 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 AC008065.1-201ENST00000428525 348 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXA2O43364 CYCSP6-201ENST00000434498 302 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 RPS20P1-201ENST00000434853 354 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXA2O43364 RN7SL188P-201ENST00000469842 285 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 RPL23AP2-201ENST00000471227 466 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 DUTP1-201ENST00000493631 470 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXA2O43364 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA2O43364 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXA2O43364 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA2O43364 CBX3P4-201ENST00000538909 354 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 AP002770.2-201ENST00000543613 532 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 AC005951.2-201ENST00000576282 495 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 MIR5696-201ENST00000578474 85 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 MIR4496-201ENST00000635896 61 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HOXA2O43364 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXA2O43364 AC005224.3-201ENST00000584683 2140 ntBASIC6.07□□□□□ -1.44
HOXA2O43364 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA2O43364 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA2O43364 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA2O43364 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HOXA2O43364 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
HOXA2O43364 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HOXA2O43364 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
HOXA2O43364 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA2O43364 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HOXA2O43364 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA2O43364 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA2O43364 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA2O43364 RPL9P7-201ENST00000330965 580 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 RNU6-1155P-201ENST00000363554 107 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 Y_RNA.199-201ENST00000364014 102 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.06□□□□□ -1.44
HOXA2O43364 RNU6-1179P-201ENST00000384667 107 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HOXA2O43364 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HOXA2O43364 AL133388.1-201ENST00000404509 287 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 RNU2-43P-201ENST00000410306 190 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 EI24P1-201ENST00000416584 867 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 CRIP1P1-201ENST00000427567 185 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AC091286.1-201ENST00000431233 461 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 OR4C10P-201ENST00000434991 931 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 OR6D1P-201ENST00000436165 939 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AC004938.1-201ENST00000438468 308 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AL513043.1-201ENST00000439124 535 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.06□□□□□ -1.44
HOXA2O43364 U8.21-201ENST00000459536 136 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 RPL9P9-202ENST00000466501 579 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 RPL30P10-201ENST00000488148 337 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA2O43364 MIR4300-201ENST00000581016 96 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AL596275.2-204ENST00000641628 552 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AL596275.2-206ENST00000641957 626 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AP005435.3-201ENST00000531260 3198 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA2O43364 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA2O43364 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA2O43364 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HOXA2O43364 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HOXA2O43364 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA2O43364 LINC02555-201ENST00000563933 1951 ntBASIC6.06□□□□□ -1.44
HOXA2O43364 AC015799.1-201ENST00000622996 3122 ntBASIC6.05□□□□□ -1.44
HOXA2O43364 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXA2O43364 AC139769.1-204ENST00000472297 1931 ntBASIC6.05□□□□□ -1.44
HOXA2O43364 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA2O43364 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXA2O43364 RLIMP1-201ENST00000339626 1680 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms