Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR3921-201ENST00000577308 85 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.88□□□□□ -2.11
HMGB3O15347 MIR3158-1-201ENST00000583596 81 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC005498.1-201ENST00000592125 465 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 YPEL5P2-201ENST00000605553 359 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL137246.1-201ENST00000607072 977 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC103710.4-201ENST00000609301 899 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.88□□□□□ -2.11
HMGB3O15347 AC005332.10-201ENST00000612725 619 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL450472.3-201ENST00000615578 367 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL160394.1-201ENST00000624765 724 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL590396.2-201ENST00000636511 1041 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AP003399.1-201ENST00000637534 361 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 MTCO1P18-201ENST00000455518 1419 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
HMGB3O15347 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMGB3O15347 AC097714.1-201ENST00000511272 1647 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMGB3O15347 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMGB3O15347 AL359851.1-201ENST00000569460 4997 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 Y_RNA.126-201ENST00000363382 111 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 SNORA38-201ENST00000363946 132 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 RN7SKP226-201ENST00000364912 300 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 OR5H15-201ENST00000383696 930 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 SNORD51-201ENST00000384320 80 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 U3.40-201ENST00000408706 208 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGB3O15347 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGB3O15347 PNRC2P1-201ENST00000423940 420 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 AC007560.1-201ENST00000426912 237 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGB3O15347 XKRY2-201ENST00000442362 1093 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 RPS26P30-201ENST00000443431 335 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMGB3O15347 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGB3O15347 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMGB3O15347 AL359273.1-201ENST00000510918 627 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGB3O15347 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGB3O15347 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGB3O15347 BTF3P12-201ENST00000519620 469 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.87□□□□□ -2.11
HMGB3O15347 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGB3O15347 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGB3O15347 AC068135.2-201ENST00000569293 1028 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGB3O15347 AC097504.2-201ENST00000608088 454 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 AC025594.3-201ENST00000613068 790 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 AC006133.1-201ENST00000617106 264 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMGB3O15347 AL355596.1-201ENST00000565399 3996 ntBASIC1.87□□□□□ -2.11
HMGB3O15347 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMGB3O15347 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
HMGB3O15347 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGB3O15347 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGB3O15347 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGB3O15347 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGB3O15347 HMGB1P5-201ENST00000255320 642 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HMGB3O15347 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
HMGB3O15347 RNA5SP27-201ENST00000363839 119 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGB3O15347 RNU6-1035P-201ENST00000384477 107 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AL023807.1-201ENST00000407932 359 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 MTATP6P11-201ENST00000428071 670 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AL031659.1-201ENST00000447075 539 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 FAM133DP-201ENST00000464802 691 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AC090515.1-201ENST00000465295 476 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AL049714.1-201ENST00000466686 347 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 LINC00888-204ENST00000487386 421 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AC006390.1-201ENST00000508068 283 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AC104108.1-201ENST00000509930 412 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 SETP12-201ENST00000514068 805 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGB3O15347 OR5AK1P-201ENST00000524837 922 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AC118942.1-201ENST00000529674 1035 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGB3O15347 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGB3O15347 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGB3O15347 SNORD39.3-201ENST00000584451 71 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGB3O15347 SNORD14A-201ENST00000606526 91 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGB3O15347 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGB3O15347 MIR7515-201ENST00000637837 67 ntBASIC1.86□□□□□ -2.11
HMGB3O15347 MTND4P35-201ENST00000604257 1375 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGB3O15347 CKAP2P1-201ENST00000555477 2049 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMGB3O15347 FAM133CP-201ENST00000332869 704 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AL591416.1-201ENST00000404015 867 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 SNORD23.1-201ENST00000408212 104 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGB3O15347 RNU6-920P-201ENST00000410926 92 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 RPS3AP25-201ENST00000411660 793 ntBASIC1.85□□□□□ -2.11
HMGB3O15347 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGB3O15347 SEPT2P1-201ENST00000419651 180 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms