Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC090425.2-201ENST00000608818 501 ntBASIC2.71□□□□□ -1.98
CHD1O14646 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CHD1O14646 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.7□□□□□ -1.98
CHD1O14646 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD1O14646 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD1O14646 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD1O14646 AL157827.1-201ENST00000447622 132 ntBASIC2.7□□□□□ -1.98
CHD1O14646 CALM1P2-201ENST00000452941 448 ntBASIC2.7□□□□□ -1.98
CHD1O14646 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD1O14646 RN7SKP49-201ENST00000516675 260 ntBASIC2.7□□□□□ -1.98
CHD1O14646 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.7□□□□□ -1.98
CHD1O14646 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD1O14646 AL512283.1-201ENST00000606756 1384 ntBASIC2.69□□□□□ -1.98
CHD1O14646 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CHD1O14646 RNU6-60P-201ENST00000364792 103 ntBASIC2.69□□□□□ -1.98
CHD1O14646 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHD1O14646 AC023128.2-201ENST00000420880 1223 ntBASIC2.69□□□□□ -1.98
CHD1O14646 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD1O14646 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.69□□□□□ -1.98
CHD1O14646 AC025033.1-201ENST00000463883 194 ntBASIC2.69□□□□□ -1.98
CHD1O14646 HMGN1P7-201ENST00000491722 313 ntBASIC2.69□□□□□ -1.98
CHD1O14646 AP002748.2-201ENST00000528671 348 ntBASIC2.69□□□□□ -1.98
CHD1O14646 VN1R84P-201ENST00000593697 235 ntBASIC2.69□□□□□ -1.98
CHD1O14646 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHD1O14646 RNU1-42P-201ENST00000364033 160 ntBASIC2.68□□□□□ -1.98
CHD1O14646 MTND4P13-201ENST00000402078 1023 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD1O14646 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.68□□□□□ -1.98
CHD1O14646 RNU6-717P-201ENST00000459076 104 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AC069528.1-202ENST00000482888 637 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AC135721.1-201ENST00000497954 479 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AC109471.1-201ENST00000511631 612 ntBASIC2.68□□□□□ -1.98
CHD1O14646 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.68□□□□□ -1.98
CHD1O14646 AL356575.1-201ENST00000603008 283 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AC013444.2-201ENST00000603317 787 ntBASIC2.68□□□□□ -1.98
CHD1O14646 ZNF876P-202ENST00000398732 1485 ntBASIC2.68□□□□□ -1.98
CHD1O14646 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD1O14646 SNORA31-201ENST00000362607 130 ntBASIC2.68□□□□□ -1.98
CHD1O14646 RNU1-93P-201ENST00000364704 169 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AF274854.1-201ENST00000413236 615 ntBASIC2.68□□□□□ -1.98
CHD1O14646 MED6P1-201ENST00000439659 713 ntBASIC2.68□□□□□ -1.98
CHD1O14646 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.68□□□□□ -1.98
CHD1O14646 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD1O14646 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.68□□□□□ -1.98
CHD1O14646 LTV1P1-201ENST00000510683 1237 ntBASIC2.68□□□□□ -1.98
CHD1O14646 RNU6-56P-201ENST00000516986 93 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AL163153.1-201ENST00000554223 283 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AC104581.2-201ENST00000572227 430 ntBASIC2.68□□□□□ -1.98
CHD1O14646 OR10AB1P-201ENST00000609613 938 ntBASIC2.68□□□□□ -1.98
CHD1O14646 AC006023.2-201ENST00000609916 167 ntBASIC2.68□□□□□ -1.98
CHD1O14646 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD1O14646 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.67□□□□□ -1.98
CHD1O14646 RNA5SP338-201ENST00000410495 85 ntBASIC2.67□□□□□ -1.98
CHD1O14646 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.67□□□□□ -1.98
CHD1O14646 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD1O14646 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.67□□□□□ -1.98
CHD1O14646 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
CHD1O14646 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CHD1O14646 OR4G11P-202ENST00000642116 1414 ntBASIC2.67□□□□□ -1.98
CHD1O14646 ZNF720P1-201ENST00000562403 1939 ntBASIC2.66□□□□□ -1.98
CHD1O14646 BNIP3P2-201ENST00000441221 577 ntBASIC2.66□□□□□ -1.98
CHD1O14646 AL590664.1-201ENST00000448065 339 ntBASIC2.66□□□□□ -1.98
CHD1O14646 AL021397.1-201ENST00000451806 248 ntBASIC2.66□□□□□ -1.98
CHD1O14646 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CHD1O14646 DUXAP3-201ENST00000603616 594 ntBASIC2.66□□□□□ -1.98
CHD1O14646 AC092954.1-201ENST00000609121 445 ntBASIC2.66□□□□□ -1.98
CHD1O14646 MIR3199-2-201ENST00000636243 86 ntBASIC2.66□□□□□ -1.98
CHD1O14646 MIR6767-201ENST00000637302 66 ntBASIC2.66□□□□□ -1.98
CHD1O14646 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHD1O14646 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.65□□□□□ -1.98
CHD1O14646 AC073901.1-201ENST00000462471 408 ntBASIC2.65□□□□□ -1.98
CHD1O14646 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.65□□□□□ -1.98
CHD1O14646 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.65□□□□□ -1.98
CHD1O14646 SNORD53B-201ENST00000577887 78 ntBASIC2.65□□□□□ -1.98
CHD1O14646 AC136443.5-201ENST00000603741 370 ntBASIC2.65□□□□□ -1.98
CHD1O14646 AC010200.2-201ENST00000605098 235 ntBASIC2.65□□□□□ -1.98
CHD1O14646 KATNBL1P1-201ENST00000605192 748 ntBASIC2.65□□□□□ -1.98
CHD1O14646 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.65□□□□□ -1.98
CHD1O14646 STMN1P1-201ENST00000617809 440 ntBASIC2.65□□□□□ -1.98
CHD1O14646 AC090617.7-201ENST00000623952 126 ntBASIC2.65□□□□□ -1.98
CHD1O14646 AC138649.5-201ENST00000637456 137 ntBASIC2.65□□□□□ -1.98
CHD1O14646 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHD1O14646 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHD1O14646 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.65□□□□□ -1.99
CHD1O14646 MCTS2P-201ENST00000394552 546 ntBASIC2.65□□□□□ -1.99
CHD1O14646 RPL23AP29-201ENST00000397284 453 ntBASIC2.65□□□□□ -1.99
CHD1O14646 AP000567.1-201ENST00000406413 156 ntBASIC2.65□□□□□ -1.99
CHD1O14646 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
CHD1O14646 HMGB1P12-201ENST00000438594 598 ntBASIC2.65□□□□□ -1.99
CHD1O14646 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.65□□□□□ -1.99
CHD1O14646 AC027673.1-201ENST00000456245 405 ntBASIC2.65□□□□□ -1.99
CHD1O14646 AF131216.2-201ENST00000512316 564 ntBASIC2.65□□□□□ -1.99
CHD1O14646 RNU1-92P-201ENST00000517017 135 ntBASIC2.65□□□□□ -1.99
CHD1O14646 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.65□□□□□ -1.99
CHD1O14646 RPL23AP78-201ENST00000599928 470 ntBASIC2.65□□□□□ -1.99
CHD1O14646 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.65□□□□□ -1.99
CHD1O14646 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.65□□□□□ -1.99
CHD1O14646 AL353770.2-201ENST00000620024 78 ntBASIC2.65□□□□□ -1.99
CHD1O14646 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CHD1O14646 RNA5SP189-201ENST00000364920 115 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms