Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3□□□□□ -1.93
NPIPA2E9PIF3 RPL21P13-201ENST00000488305 481 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA2E9PIF3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA2E9PIF3 AC017037.2-201ENST00000513850 890 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AC103783.1-201ENST00000520506 373 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 OR6C7P-201ENST00000547875 934 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3□□□□□ -1.93
NPIPA2E9PIF3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPIPA2E9PIF3 AC090615.1-201ENST00000577519 154 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AC011471.1-201ENST00000585766 187 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AL133507.1-201ENST00000605269 557 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AC107952.2-201ENST00000606048 486 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA2E9PIF3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA2E9PIF3 AL590099.1-201ENST00000615276 138 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AL356321.1-201ENST00000621360 228 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AC079228.1-201ENST00000624774 1049 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 AC006927.4-201ENST00000639187 543 ntBASIC3□□□□□ -1.93
NPIPA2E9PIF3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPIPA2E9PIF3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA2E9PIF3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 FRG1BP-201ENST00000278882 761 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 DEFB108F-201ENST00000344638 222 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 SNORA48.5-201ENST00000391143 135 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 RPS4XP3-201ENST00000398541 413 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 RPL5P18-201ENST00000406671 891 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 TMEM167AP1-201ENST00000423409 219 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 OR2B8P-201ENST00000432841 938 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC024082.2-201ENST00000434771 238 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL671855.1-201ENST00000446875 1203 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 MTND1P31-201ENST00000449206 961 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 RPL7P23-201ENST00000493874 747 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 DEFB108D-201ENST00000527787 222 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 VN1R92P-201ENST00000598511 928 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL139418.1-201ENST00000613613 177 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL357080.1-201ENST00000617394 239 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC011330.2-201ENST00000621680 635 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AL445264.1-201ENST00000621719 171 ntBASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA2E9PIF3 CR383658.2-201ENST00000547576 1525 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 MTND5P7-201ENST00000413558 1798 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 FAM133CP-201ENST00000332869 704 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 MIR30E-201ENST00000362104 92 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 RNA5SP374-201ENST00000362939 125 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 SNORA4.1-201ENST00000364263 144 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 RNU6-157P-201ENST00000383957 107 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL031121.1-201ENST00000406553 254 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 RNA5SP38-201ENST00000410750 119 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 RNA5SP31-201ENST00000411144 127 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC096664.2-201ENST00000411843 406 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 CCDC58P2-201ENST00000417131 366 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC012498.1-201ENST00000424037 437 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 BX119904.4-201ENST00000424402 301 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL590664.1-201ENST00000448065 339 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 MRPS31P2-201ENST00000451581 518 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AL359385.1-201ENST00000456509 365 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC010401.1-201ENST00000463867 348 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 RPL30P14-201ENST00000482744 348 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 HMGB1P36-201ENST00000487709 576 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC022483.1-201ENST00000514020 567 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 GMPSP1-201ENST00000514075 579 ntBASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPA2E9PIF3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms