Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 COX6CP3-201ENST00000580869 223 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AL158211.4-201ENST00000606988 584 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC126118.1-201ENST00000607744 628 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC004908.2-201ENST00000609090 574 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 TUG1_1.1-201ENST00000610654 145 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 MIR378J-201ENST00000611988 109 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC112204.3-201ENST00000623822 332 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 SEPT14P19-203ENST00000633205 211 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 OR5H6-203ENST00000642105 978 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 HSPA8P1-201ENST00000425843 1833 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 MFSD8-236ENST00000641509 4050 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 OR5J1P-201ENST00000313544 939 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 RNA5SP42-201ENST00000364278 115 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 MIR30B-201ENST00000384850 88 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 MIR141-201ENST00000384975 95 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 RPL17P50-201ENST00000396131 546 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC127391.1-201ENST00000411737 98 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AL137014.1-201ENST00000420490 1226 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC133104.1-201ENST00000429100 218 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 RPL31P35-201ENST00000431058 377 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AL358934.1-201ENST00000432346 324 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 RPL35AP22-201ENST00000436855 335 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 MTATP6P13-201ENST00000438531 667 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC093156.1-201ENST00000440382 670 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC132479.1-201ENST00000449160 144 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 NANOGP10-201ENST00000453325 895 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 C1DP4-201ENST00000455429 424 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC146944.2-203ENST00000502493 354 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC011352.1-201ENST00000512300 793 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC139495.1-202ENST00000513164 354 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC087499.8-201ENST00000578406 226 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 MIR3167-201ENST00000579623 85 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 HMGN2P28-201ENST00000606102 262 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC007038.2-201ENST00000608095 740 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC068944.2-201ENST00000610373 403 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC245517.5-201ENST00000611529 162 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC023043.4-201ENST00000612081 449 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC090970.3-201ENST00000612566 866 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AL133173.2-201ENST00000614270 90 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 MIR6130-201ENST00000619419 109 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AL160394.1-201ENST00000624765 724 ntBASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.75□□□□□ -1.81
TCRBV7S3A2A0A539 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 RNY4P16-201ENST00000364768 94 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 MIR135A2-201ENST00000384854 100 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 SNORA3.3-201ENST00000408712 125 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 CCDC58P2-201ENST00000417131 366 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC019097.1-201ENST00000424783 735 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 TIMM9P3-201ENST00000428659 274 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms