Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 SEPT7P7-201ENST00000420492 1301 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 RNU6-859P-201ENST00000362728 107 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 RNU6-777P-201ENST00000364265 104 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AL031679.1-201ENST00000400616 525 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AL121972.1-201ENST00000402023 252 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC084290.1-201ENST00000434995 374 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 ELOCP13-201ENST00000443934 329 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 USP9YP34-201ENST00000453983 808 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 SNORD109B-201ENST00000458961 67 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 SNORD109A-201ENST00000459128 67 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 SYPL1P1-201ENST00000473622 768 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 RN7SL432P-201ENST00000484057 298 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AP001025.2-201ENST00000490908 477 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 HMGB1P22-201ENST00000505315 124 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 HMGB3P15-201ENST00000507326 574 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 XKRY-201ENST00000510392 1100 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC026412.2-201ENST00000512270 1075 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 RNU6-583P-201ENST00000516012 92 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 RN7SKP244-201ENST00000516513 307 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC087276.1-201ENST00000529659 480 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 OR6C73P-201ENST00000546432 358 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC126177.3-201ENST00000551839 688 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC009097.3-201ENST00000563557 1018 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC010928.3-201ENST00000587712 541 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 CYP3A51P-201ENST00000633513 256 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC090897.3-201ENST00000636973 1157 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
TRAV40A0A0B4J280 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.28□□□□□ -2.05
TRAV40A0A0B4J280 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
TRAV40A0A0B4J280 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
TRAV40A0A0B4J280 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-1249P-201ENST00000363237 111 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MIR196B-201ENST00000384852 84 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-952P-201ENST00000391164 108 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AL031121.1-201ENST00000406553 254 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC007742.1-201ENST00000425789 329 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 ELOCP26-201ENST00000436067 329 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MTND2P20-201ENST00000440805 661 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MTND3P1-201ENST00000441336 220 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 COX6CP2-201ENST00000444980 225 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MTND1P16-201ENST00000465177 898 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 RPL31P50-201ENST00000471002 296 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AP004217.1-201ENST00000480579 346 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 HMGB1P36-201ENST00000487709 576 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 RPL5P23-201ENST00000496040 868 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC117522.3-201ENST00000507974 584 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC006499.2-201ENST00000513470 337 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC034159.1-201ENST00000513885 583 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 SNORA31.21-201ENST00000517180 77 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 EEF1A1P37-201ENST00000522748 715 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC007536.1-201ENST00000533382 349 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AL512347.1-201ENST00000566420 503 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC022662.1-201ENST00000580252 331 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MIR3162-201ENST00000581818 82 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC234772.3-201ENST00000602277 528 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms