Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 Y_RNA.23-201ENST00000362496 106 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 RNA5SP305-201ENST00000362665 119 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 SNORA46.1-201ENST00000391069 153 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 RPL30P13-201ENST00000418873 348 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 ANXA2P1-201ENST00000505539 926 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 RN7SKP60-201ENST00000516985 239 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 HMGB1P40-201ENST00000525121 540 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AC116158.1-201ENST00000560231 2129 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AC104581.2-201ENST00000572227 430 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 MIR5692C2-201ENST00000577959 77 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AC009318.2-201ENST00000610917 651 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AL031119.1-201ENST00000404707 1879 ntBASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC61Q9Y6R9 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CCDC61Q9Y6R9 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.59□□□□□ -1.2
CCDC61Q9Y6R9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.59□□□□□ -1.2
CCDC61Q9Y6R9 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.59□□□□□ -1.2
CCDC61Q9Y6R9 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AC011933.2-201ENST00000578539 2790 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AP000432.2-201ENST00000624164 2048 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 RNA5SP443-201ENST00000363083 132 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 RNA5SP514-201ENST00000363717 111 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AC024067.1-201ENST00000426199 223 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 LRRC37A5P-203ENST00000580181 585 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AC006116.3-201ENST00000592968 361 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AC069307.1-201ENST00000602820 447 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AC243654.2-201ENST00000612843 443 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 TUG1_2.1-201ENST00000614234 87 ntBASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC61Q9Y6R9 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 RNU1-130P-201ENST00000363930 160 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 RNU6-818P-201ENST00000364837 108 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 RNU1-43P-201ENST00000365052 165 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 DUTP5-201ENST00000406790 469 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 RNU4-30P-201ENST00000410245 143 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 AL358453.1-201ENST00000422522 250 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 AC010683.1-201ENST00000473673 378 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 AP004242.1-201ENST00000533701 349 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 AL133393.1-201ENST00000603277 287 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 AC039056.2-201ENST00000622261 511 ntBASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CCDC61Q9Y6R9 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 Y_RNA.405-201ENST00000383979 100 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 RNU1-136P-201ENST00000384181 164 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 Y_RNA.451-201ENST00000384200 100 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 Y_RNA.524-201ENST00000384564 100 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms